RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.79□□□□□ -0.52
SMG6-203ENST00000536871 COMMD7Q86VX2 200 aa11.79□□□□□ -0.52
SMG6-203ENST00000536871 OR5D18Q8NGL1 313 aa11.79□□□□□ -0.52
SMG6-203ENST00000536871 OR2AE1Q8NHA4 323 aa11.79□□□□□ -0.52
SMG6-203ENST00000536871 SLC39A7Q92504 469 aa11.79□□□□□ -0.52
SMG6-203ENST00000536871 ELMOD3Q96FG2 381 aa11.79□□□□□ -0.52
SMG6-203ENST00000536871 IFT22Q9H7X7 185 aa11.79□□□□□ -0.52
SMG6-203ENST00000536871 HEXA-AS1Q9H8Q6 139 aa11.79□□□□□ -0.52
SMG6-203ENST00000536871 KIF25Q9UIL4 384 aa11.79□□□□□ -0.52
SMG6-203ENST00000536871 C9orf170A2RU37 121 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A10PA6NDY2 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A18PA6NE21 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A16PA6NEW6 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A20PA6NIJ5 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A8PA6NJQ4 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A7PA6NKC0 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A22PA8MWA6 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A12PA8MX19 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A5PA8MXJ8 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A23PA8MXZ1 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 PMP2P02689 132 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A15PP0C7V4 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A13PP0C7W8 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A14PP0C7W9 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM90A24PP0C7X0 464 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 RPA2P15927 270 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 MPGP29372 298 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 TNFSF10P50591 281 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 SNU13P55769 128 aaKnown RBP11.78□□□□□ -0.52
SMG6-203ENST00000536871 RNF144BQ7Z419 303 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 C1QL2Q7Z5L3 287 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 SAXO1Q8IYX7 474 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 DEFB124Q8NES8 71 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 OR5AP2Q8NGF4 316 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 PRRX2Q99811 253 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 ZNF552Q9H707 407 aaPredicted RBP11.78□□□□□ -0.52
SMG6-203ENST00000536871 GPR132Q9UNW8 380 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 VCANP13611 3396 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 A0A1W2PP11 408 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FAM230AA0A1W2PPH8 454 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 HTR3BO95264 441 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 S100A11P31949 105 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 ZNF92Q03936 586 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 PLEKHN1Q494U1 663 aaPredicted RBP11.78□□□□□ -0.52
SMG6-203ENST00000536871 CHRFAM7AQ494W8 412 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 IGFL2Q6UWQ7 119 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 PEG10Q86TG7 708 aaKnown RBP11.78□□□□□ -0.52
SMG6-203ENST00000536871 LHFPL1Q86WI0 220 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 OR5L1Q8NGL2 311 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 FGFBP3Q8TAT2 258 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 WDYHV1Q96HA8 205 aa11.78□□□□□ -0.52
SMG6-203ENST00000536871 REPIN1Q9BWE0 567 aaKnown RBP11.78□□□□□ -0.52
SMG6-203ENST00000536871 A0A0D9SG52 128 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 SLC22A20A6NK97 555 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 EFSO43281 561 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 CST4P01036 141 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 IGHG3P01860 377 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 PATE4P0C8F1 98 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 PPP3CBP16298 524 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 SDHBP21912 280 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 PDZK1IP1Q13113 114 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 FBXW9Q5XUX1 488 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 PLCXD3Q63HM9 321 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 MRPL21Q7Z2W9 205 aaKnown RBP11.77□□□□□ -0.53
SMG6-203ENST00000536871 OR8H3Q8N146 312 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 OSR2Q8N2R0 312 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 CPEB3Q8NE35 698 aaKnown RBP11.77□□□□□ -0.53
SMG6-203ENST00000536871 EMG1Q92979 244 aaKnown RBP11.77□□□□□ -0.53
SMG6-203ENST00000536871 RBPMSQ93062 196 aaKnown RBP11.77□□□□□ -0.53
SMG6-203ENST00000536871 GMPPAQ96IJ6 420 aaPredicted RBP11.77□□□□□ -0.53
SMG6-203ENST00000536871 PARD6AQ9NPB6 346 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 ASCL3Q9NQ33 180 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 SESN1Q9Y6P5 492 aa11.77□□□□□ -0.53
SMG6-203ENST00000536871 TRAV17A0A0B4J275 112 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 OR2AT4A6NND4 320 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 PRR33A8MZF0 331 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 KRBOX1C9JBD0 128 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 RP2O75695 350 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 RAD51DO75771 328 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 CNOT4O95628 575 aaKnown RBP11.76□□□□□ -0.53
SMG6-203ENST00000536871 SLC25A4P12235 298 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 EDN3P14138 238 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 PPP1R1AQ13522 171 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 MOB3CQ70IA8 216 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 OVCH2Q7RTZ1 564 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 LINC00469Q8N7U9 141 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 Q8NFD4 153 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 COQ8AQ8NI60 647 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 PIGCQ92535 297 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 PDCD10Q9BUL8 212 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 DPCDQ9BVM2 203 aaPredicted RBP11.76□□□□□ -0.53
SMG6-203ENST00000536871 NCOA6Q14686 2063 aaPredicted RBP11.76□□□□□ -0.53
SMG6-203ENST00000536871 FIGNL2A6NMB9 653 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 SS18L1O75177 396 aaPredicted RBP11.76□□□□□ -0.53
SMG6-203ENST00000536871 IGHV3-9P01782 118 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 APLNRP35414 380 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 RAB1AP62820 205 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 TGFBR3Q03167 851 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 CLN3Q13286 438 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 ZNF345Q14585 488 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms