RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 EBF4Q9BQW3 602 aa4.91□□□□□ -1.62
CCDC60-203ENST00000536742 ACPTQ9BZG2 426 aa4.91□□□□□ -1.62
CCDC60-203ENST00000536742 LINC00470Q9BZP3 86 aa4.91□□□□□ -1.62
CCDC60-203ENST00000536742 WDR13Q9H1Z4 485 aa4.91□□□□□ -1.62
CCDC60-203ENST00000536742 DNAJC4Q9NNZ3 241 aa4.91□□□□□ -1.62
CCDC60-203ENST00000536742 MIEF1Q9NQG6 463 aa4.91□□□□□ -1.62
CCDC60-203ENST00000536742 PPP1R3CQ9UQK1 317 aa4.91□□□□□ -1.62
CCDC60-203ENST00000536742 TRAPPC4Q9Y296 219 aa4.91□□□□□ -1.62
CCDC60-203ENST00000536742 NDUFAF1Q9Y375 327 aa4.91□□□□□ -1.62
CCDC60-203ENST00000536742 KPTNQ9Y664 436 aa4.91□□□□□ -1.62
CCDC60-203ENST00000536742 H0YAE9 185 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 GMNNO75496 209 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 ANP32DO95626 131 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 RAB36O95755 333 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 NTSP30990 170 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 MPIP34949 423 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 SAA4P35542 130 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 MRPL19P49406 292 aaKnown RBP4.9□□□□□ -1.63
CCDC60-203ENST00000536742 CLK1P49759 484 aaKnown RBP4.9□□□□□ -1.63
CCDC60-203ENST00000536742 BMXP51813 675 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 POLR2JP52435 117 aaKnown RBP4.9□□□□□ -1.63
CCDC60-203ENST00000536742 CAPZA1P52907 286 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 ATP12AP54707 1039 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 CLDN8P56748 225 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 RAB25P57735 213 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 GLO1Q04760 184 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 MZT1Q08AG7 82 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 RBBP4Q09028 425 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 C2orf80Q0P641 193 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 TRAP1Q12931 704 aaKnown RBP4.9□□□□□ -1.63
CCDC60-203ENST00000536742 TOMM34Q15785 309 aaPredicted RBP4.9□□□□□ -1.63
CCDC60-203ENST00000536742 RFTN2Q52LD8 501 aaPredicted RBP4.9□□□□□ -1.63
CCDC60-203ENST00000536742 COQ5Q5HYK3 327 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 LCE1EQ5T753 118 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 FAM91A1Q658Y4 838 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.9□□□□□ -1.63
CCDC60-203ENST00000536742 MSANTD1Q6ZTZ1 278 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 NOTCH2NLQ7Z3S9 236 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 COMMD6Q7Z4G1 85 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 VMO1Q7Z5L0 202 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 VRK2Q86Y07 508 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 ZIC4Q8N9L1 334 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 SLC26A10Q8NG04 563 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 OR52H1Q8NGJ2 320 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 SLC26A7Q8TE54 656 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 ZNRF4Q8WWF5 429 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 ST6GALNAC6Q969X2 333 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 PPCDCQ96CD2 204 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 C4orf45Q96LM5 186 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 ZNF75AQ96N20 296 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 OR52B2Q96RD2 323 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 ARHGDIGQ99819 225 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 TMEM246Q9BRR3 403 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 C1orf50Q9BV19 199 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 TUBB1Q9H4B7 451 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 REEP4Q9H6H4 257 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 SIRT7Q9NRC8 400 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 FARSBQ9NSD9 589 aaKnown RBP4.9□□□□□ -1.63
CCDC60-203ENST00000536742 AIG1Q9NVV5 245 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 CCDC167Q9P0B6 97 aa4.9□□□□□ -1.63
CCDC60-203ENST00000536742 POLR3HQ9Y535 204 aaPredicted RBP4.9□□□□□ -1.63
CCDC60-203ENST00000536742 EVPLLA8MZ36 301 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 C16orf90A8MZG2 172 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 H3BNH8 94 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 GYG2O15488 501 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 HLA-HP01893 362 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 COX4I1P13073 169 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 PPIBP23284 216 aaKnown RBP4.89□□□□□ -1.63
CCDC60-203ENST00000536742 GABRA3P34903 492 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 OR2B6P58173 313 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 SLC35A1P78382 337 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 PMS2P3Q13401 168 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 QPRTQ15274 297 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 CD226Q15762 336 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 HAGHQ16775 308 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 MRGPRG-AS1Q2M3A8 158 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 ZNF404Q494X3 552 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 DNAL1Q4LDG9 190 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 CGB2Q6NT52 195 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 CBLN3Q6UW01 205 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 PET117Q6UWS5 81 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 ZNF841Q6ZN19 808 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 ARPINQ7Z6K5 226 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 RNF130Q86XS8 419 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 OR9A2Q8NGT5 310 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 C16orf78Q8WTQ4 265 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 ST8SIA1Q92185 356 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 MCUR1Q96AQ8 359 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 TESCQ96BS2 214 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 ROPN1LQ96C74 230 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 TECTBQ96PL2 329 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 TSSK3Q96PN8 268 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 OR52E6Q96RD3 313 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 ATF6BQ99941 703 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 HOPXQ9BPY8 73 aaPredicted RBP4.89□□□□□ -1.63
CCDC60-203ENST00000536742 MMADHCQ9H3L0 296 aaPredicted RBP4.89□□□□□ -1.63
CCDC60-203ENST00000536742 TMEM181Q9P2C4 612 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 ERVK-18Q9QC07 812 aa4.89□□□□□ -1.63
CCDC60-203ENST00000536742 PKD1P98161 4303 aa4.88□□□□□ -1.63
CCDC60-203ENST00000536742 FAT2Q9NYQ8 4349 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms