RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, human

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD4-205	ENST00000536301	CLU	P10909	449 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	PRDX2	P32119	198 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	GDNF	P39905	211 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	RPS6KA3	P51812	740 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	SLC7A2	P52569	658 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	ZNF121	P58317	390 aa	Predicted RBP	4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	ACTA2	P62736	377 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	ACTG2	P63267	376 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	SELENOW	P63302	87 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	ACTC1	P68032	377 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	ACTA1	P68133	377 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	RIPK1	Q13546	671 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	ZNF260	Q3ZCT1	412 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	CEP78	Q5JTW2	689 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	LCN8	Q6JVE9	175 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	HAGHL	Q6PII5	290 aa	Predicted RBP	4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	SMARCD3	Q6STE5	483 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	LHFPL2	Q6ZUX7	228 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	ZNF695	Q8IW36	515 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	OR13D1	Q8NGV5	346 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	FANK1	Q8TC84	345 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	LZIC	Q8WZA0	190 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	AQP3	Q92482	292 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	ITFG2	Q969R8	447 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	ISOC1	Q96CN7	298 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	RBM14	Q96PK6	669 aa	Known RBP	4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	FUZ	Q9BT04	418 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	OR52D1	Q9H346	318 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	OPA3	Q9H6K4	179 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	ETAA1	Q9NY74	926 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	TAS2R1	Q9NYW7	299 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	KCNG2	Q9UJ96	466 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	HHLA2	Q9UM44	414 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	LRP12	Q9Y561	859 aa		4.09	□□□□□ -1.75
CHD4-205	ENST00000536301	FAM220BP	B1ANY3	271 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	ZNF878	C9JN71	531 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	ARPC3	O15145	178 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	JTB	O76095	146 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	ZNF682	O95780	498 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	CST4	P01036	141 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	TK1	P04183	234 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	SPN	P16150	400 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	EDDM3B	P56851	147 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	EIF2B1	Q14232	305 aa	Known RBP	4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	KRT72	Q14CN4	511 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	TAF13	Q15543	124 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	FGD3	Q5JSP0	725 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	MINOS1	Q5TGZ0	78 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	C16orf82	Q7Z2V1	217 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	CPLX4	Q7Z7G2	160 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	ZDHHC23	Q8IYP9	409 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	POC1A	Q8NBT0	407 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	CSNK2A3	Q8NEV1	391 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	PROKR2	Q8NFJ6	384 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	OR5M8	Q8NGP6	311 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	OR4Q3	Q8NH05	313 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	PGAM5	Q96HS1	289 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	HSH2D	Q96JZ2	352 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	ATP6V1G3	Q96LB4	118 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	CDRT15	Q96T59	188 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	IFT27	Q9BW83	186 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	C1orf21	Q9H246	121 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	DCLRE1B	Q9H816	532 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	ZMAT4	Q9H898	229 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	RETN	Q9HD89	108 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	ZFP57	Q9NU63	452 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	KIAA1456	Q9P272	454 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	ZMAT5	Q9UDW3	170 aa	Known RBP	4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	OR14J1	Q9UGF5	321 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	TMEM5	Q9Y2B1	443 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	MPC1	Q9Y5U8	109 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	LYVE1	Q9Y5Y7	322 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	ENPP4	Q9Y6X5	453 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	MINOS1-NBL1	R4GNA1	71 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	HERC1	Q15751	4861 aa		4.08	□□□□□ -1.76
CHD4-205	ENST00000536301	hCG_1809904	A0A1W2PP81	198 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301		A0A1W2PPE2	198 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301		A0A1W2PPH5	198 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301		A0A1W2PR64	198 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301		A0A1W2PRV1	198 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	TMEM82	A0PJX8	343 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301		F8VVB4	439 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301		F8VWA3	439 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301		K7N7A8	449 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	ZNF593	O00488	134 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	ZNF737	O75373	536 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	IFNA14	P01570	189 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	IGHA1	P01876	353 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	H1F0	P07305	194 aa	Known RBP	4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	HTR1D	P28221	377 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	SLC6A6	P31641	620 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	IFNA8	P32881	189 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	VEGFC	P49767	419 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	MAGOH	P61326	146 aa	Known RBP	4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	GNG3	P63215	75 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	FHL3	Q13643	280 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	EDDM3A	Q14507	147 aa		4.07	□□□□□ -1.76
CHD4-205	ENST00000536301	SNAPC1	Q16533	368 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms