RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 GALNSP34059 522 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 SP6Q3SY56 376 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 PWWP2BQ6NUJ5 590 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 ARHGAP5-AS1Q96IT6 56 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 PTGFRP43088 359 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 OXA1LQ15070 435 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 PRSS41Q7RTY9 318 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 CYR61O00622 381 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 ICMTO60725 284 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 LY86O95711 162 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 IL9P15248 144 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 TSPAN32Q96QS1 320 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 HSD17B10Q99714 261 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 UCK1Q9HA47 277 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 NIT2Q9NQR4 276 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 AMDHD2Q9Y303 409 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 ADAM20O43506 726 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 ZNF528Q3MIS6 628 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 ZNF260Q3ZCT1 412 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 BHLHA15Q7RTS1 189 aaPredicted RBP16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 TCTE3Q8IZS6 198 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 IGHV3-43A0A0B4J1X8 118 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 IGHV3-43DP0DP04 118 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 CCL2P13500 99 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 FFAR4Q5NUL3 377 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 WDR31Q8NA23 367 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 OR1L4Q8NGR5 311 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 SLC17A5Q9NRA2 495 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 HTRA4P83105 476 aaPredicted RBP16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 SFTPA2Q8IWL1 248 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 SFTPA1Q8IWL2 248 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 ZNF230Q9UIE0 474 aaPredicted RBP16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 TBX19O60806 448 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 HIST1H1DP16402 221 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 PRR7Q8TB68 274 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 GLRX2Q9NS18 164 aa16.19■□□□□ 0.18
SFSWAP-203ENST00000535236 KCNE1BA0A087WTH5 132 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 NKG7Q16617 165 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 SPINK14Q6IE38 97 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 LINC01555Q8NAE3 123 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 TMEM18Q96B42 140 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 C4orf45Q96LM5 186 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 MS4A18H0YCH9 400 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 MS4A18Q3C1V0 323 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 ZNF788Q6ZQV5 615 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 C10orf90Q96M02 699 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 FAAP24Q9BTP7 215 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 OR2D2Q9H210 308 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 NRAPQ86VF7 1730 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 ZNF716A6NP11 495 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 TOX3O15405 576 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 RAB5AP20339 215 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 ZXDAP98168 799 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 TMED3Q9Y3Q3 217 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 IGLV3-16A0A075B6K0 115 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 TMEM272A0A1B0GTI8 110 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 FXYD1O00168 92 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 PJVKQ0ZLH3 352 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 FNDC7Q5VTL7 733 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 SLC16A12Q6ZSM3 486 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 APOBEC4Q8WW27 367 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 RND1Q92730 232 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 ZNF707Q96C28 371 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 GPR87Q9BY21 358 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 FSCN3Q9NQT6 498 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 C20orf141Q9NUB4 165 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 NAGKQ9UJ70 344 aa16.18■□□□□ 0.18
SFSWAP-203ENST00000535236 PYCARD-AS1I3L0S3 204 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 CELA2BP08218 269 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 PGA3P0DJD8 388 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 AVPR2P30518 371 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 KRTDAPP60985 99 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 PLSCR3Q9NRY6 295 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 TAGLNQ01995 201 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 SLC38A11Q08AI6 406 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 SRSF5Q13243 272 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 PEX11BO96011 259 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 OR6C3Q9NZP0 311 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 SLC45A2Q9UMX9 530 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 NPTNQ9Y639 398 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 SOX15O60248 233 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 DEGS2Q6QHC5 323 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 C16orf47Q6ZP98 133 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 ZDHHC22Q8N966 263 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 OR8B3Q8NGG8 313 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 MRGPRDQ8TDS7 321 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 NOL4LQ96MY1 436 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 OR8B2Q96RD0 313 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 UBTD1Q9HAC8 227 aa16.17■□□□□ 0.18
SFSWAP-203ENST00000535236 TRAV38-1A0A0B4J264 116 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 A0A1W2PRD5 423 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 A0A1W2PRF3 423 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 A0A1W2PRM7 423 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 AMER3Q8N944 861 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 GABRG3Q99928 467 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 HSBP1O75506 76 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 TFF2Q03403 129 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 RHBDD2Q6NTF9 364 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 RAB40CQ96S21 281 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 CDX2Q99626 313 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms