RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 GTSF1Q8WW33 167 aa3.23□□□□□ -1.89
ECHDC1-223ENST00000534442 HGDQ93099 445 aa3.23□□□□□ -1.89
ECHDC1-223ENST00000534442 PCBD2Q9H0N5 130 aa3.23□□□□□ -1.89
ECHDC1-223ENST00000534442 RMND1Q9NWS8 449 aa3.23□□□□□ -1.89
ECHDC1-223ENST00000534442 SORL1Q92673 2214 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 ZNF705EA8MWA4 302 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 M0R2N4 97 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 CXCL13O43927 109 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 BRI3O95415 125 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 AGTP01019 485 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 IGHG4P01861 327 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 SMR3BP02814 79 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 OPN1SWP03999 348 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 CATP04040 527 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 OR12D1P0DN82 309 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 RPS2P15880 293 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 NPR2P20594 1047 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 HMGCS1Q01581 520 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 LRRC74AQ0VAA2 488 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 BIKQ13323 160 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 ASAH1Q13510 395 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 DDX39BQ13838 428 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 ZMYND11Q15326 602 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 Q1RN00 199 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 HIGD2BQ4VC39 106 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 PAN3Q58A45 887 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 OR5M10Q6IEU7 315 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 OR4F3Q6IEY1 312 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 CGB2Q6NT52 195 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 CCDC121Q6ZUS5 278 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 GALNT10Q86SR1 603 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 PRR22Q8IZ63 422 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 KRT222Q8N1A0 295 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 OR4K17Q8NGC6 315 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 ABHD3Q8WU67 409 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 ANKRD7Q92527 254 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 NOL4LQ96MY1 436 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 GAL3ST1Q99999 423 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 ZNF670Q9BS34 389 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 NIPSNAP3BQ9BS92 247 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 ZNF442Q9H7R0 627 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 NLE1Q9NVX2 485 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 B3GNT2Q9NY97 397 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 UBAP1Q9NZ09 502 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 DPM3Q9P2X0 92 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 PDE10AQ9Y233 779 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 AK6Q9Y3D8 172 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 TIMM10BQ9Y5J6 103 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
ECHDC1-223ENST00000534442 BTBD17A6NE02 478 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 B4DXG7 233 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 C4orf51C9J302 202 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 UBXN8O00124 270 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 NBR2O15453 112 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 FCMRO60667 390 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 PSIP1O75475 530 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 SERPINA6P08185 405 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 TCN1P20061 433 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 RPL29P47914 159 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 FNTAP49354 379 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 CCT3P49368 545 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 CEBPDP49716 269 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 RAB10P61026 200 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 STXBP1P61764 594 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 TBPL1P62380 186 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 GNB2P62879 340 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 RPL32P62910 135 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 IGLV3-21P80748 117 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 FGL1Q08830 312 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 C15orf32Q32M92 178 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 C2orf66Q6UXQ4 117 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 TPRA1Q86W33 373 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 PQLC3Q8N755 202 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 KLHL30-AS1Q8NEE0 82 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 OR4F15Q8NGB8 312 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 OR5M1Q8NGP8 315 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 TYMSOSQ8TAI1 123 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 PPWD1Q96BP3 646 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 OR5M11Q96RB7 305 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 MCHR1Q99705 422 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 EXD2Q9NVH0 621 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 ABCG2Q9UNQ0 655 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 HEY1Q9Y5J3 304 aa3.21□□□□□ -1.9
ECHDC1-223ENST00000534442 AGRNO00468 2067 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 A0A0G2JN53 185 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 A0A1B0GVL5 298 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 OR51F1A6NGY5 319 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 M0R233 179 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 FOXE1O00358 373 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 PRMT5O14744 637 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 ERI3O43414 337 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 UGT2B11O75310 529 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 NIPSNAP2O75323 286 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 ZNF254O75437 659 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 IGF2P01344 180 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 UCHL3P15374 230 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 IMPDH1P20839 514 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 CMA1P23946 247 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 MSNP26038 577 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 IMPA1P29218 277 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms