RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 TAS2R16Q9NYV7 291 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 MRPS28Q9Y2Q9 187 aaKnown RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TBL2Q9Y4P3 447 aaKnown RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 ALG6Q9Y672 507 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM56-RWDD3S4R434 201 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 NFASCO94856 1347 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 MAP1BP46821 2468 aaKnown RBP2.89□□□□□ -1.95
CSMD3-210ENST00000534172 ANKRD11Q6UB99 2663 aaPredicted RBP2.89□□□□□ -1.95
CSMD3-210ENST00000534172 IGHV3-20A0A0C4DH32 117 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 GLYATL1P3A0A0U1RQE8 302 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 KBTBD11-OT1A0A1B0GTJ5 212 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 A0A1W2PNV4 684 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 D6RAR5 112 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 G3V2L1 256 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 DFFAO00273 331 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 MRASO14807 208 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 PPIHO43447 177 aaKnown RBP2.89□□□□□ -1.95
CSMD3-210ENST00000534172 MBTPS2O43462 519 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 BRI3O95415 125 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 TTC4O95801 387 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 OR8U8P0C7N1 319 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF43P17038 809 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 HLA-GP17693 338 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 GGT2P36268 569 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 IFNGR2P38484 337 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 CCR8P51685 355 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 CRYBA2P53672 197 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 RRAS2P62070 204 aaPredicted RBP2.89□□□□□ -1.95
CSMD3-210ENST00000534172 PPP3R1P63098 170 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 CHRNB3Q05901 458 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 SLC10A7Q0GE19 358 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 SKP2Q13309 424 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM187Q14656 261 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 OR4D1Q15615 310 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 IMPG1Q17R60 797 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 ECSCRQ19T08 205 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 SYT6Q5T7P8 510 aaPredicted RBP2.89□□□□□ -1.95
CSMD3-210ENST00000534172 XAF1Q6GPH4 301 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 C3P1Q6ZMU1 363 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 MOB2Q70IA6 237 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 STRADAQ7RTN6 431 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 NOTCH2NLQ7Z3S9 236 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 TSEN54Q7Z6J9 526 aaKnown RBP2.89□□□□□ -1.95
CSMD3-210ENST00000534172 LYG2Q86SG7 212 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 SLC35F2Q8IXU6 374 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 MTURNQ8N3F0 131 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 MS4A15Q8N5U1 240 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 CSNK1A1LQ8N752 337 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 C15orf54Q8N8G6 183 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 CCDC71LQ8N9Z2 235 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 B3GNT7Q8NFL0 401 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 OR4F6Q8NGB9 312 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 OR9Q1Q8NGQ5 310 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 OR2T4Q8NH00 348 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 OR8U1Q8NH10 309 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 LCN9Q8WX39 176 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM234Q8WY98 164 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 TADA1Q96BN2 335 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 CMBLQ96DG6 245 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 CPB2Q96IY4 423 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 OR5B2Q96R09 309 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF300Q96RE9 604 aaPredicted RBP2.89□□□□□ -1.95
CSMD3-210ENST00000534172 SLC30A2Q9BRI3 323 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 CLEC7AQ9BXN2 247 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 C1orf109Q9NX04 203 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 CLN8Q9UBY8 286 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 TP53BP1Q12888 1972 aaPredicted RBP2.89□□□□□ -1.95
CSMD3-210ENST00000534172 PHIPQ8WWQ0 1821 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 PRUNE2Q8WUY3 3088 aa2.89□□□□□ -1.95
CSMD3-210ENST00000534172 IGLV7-46A0A075B6I9 117 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 KCNE1BA0A087WTH5 132 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 TRBV5-4A0A0C4DH59 114 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 A0A1B0GW15 77 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 C20orf202A1L168 122 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 KLRC4-KLRK1H3BQV0 150 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 H7C417 338 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 M0R233 179 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 TCF21O43680 179 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 FCN3O75636 299 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 CTDNEP1O95476 244 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 RPN2P04844 631 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 CD2P06729 351 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 OR56A5P0C7T3 313 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 GTF2F2P13984 249 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 CD1DP15813 335 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 PMCHP20382 165 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 SERPINA2P20848 420 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 NPBWR2P48146 333 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 RFX3P48380 749 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 GCLMP48507 274 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 CLDN18P56856 261 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 EIF2B1Q14232 305 aaKnown RBP2.88□□□□□ -1.95
CSMD3-210ENST00000534172 FCN2Q15485 313 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 CD226Q15762 336 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ISXQ2M1V0 245 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 SMIM21Q3B7S5 101 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 PYY3Q5JQD4 70 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
CSMD3-210ENST00000534172 RNF165Q6ZSG1 346 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 FAM220AQ7Z4H9 259 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms