RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 NOTOA8MTQ0 251 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 KRTAP9-7A8MTY7 169 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 EFCAB9A8MZ26 197 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 DCTN6O00399 190 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 OVOL1O14753 267 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 XRCC2O43543 280 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 TYROBPO43914 113 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 MTRF1O75570 445 aaKnown RBP4.99□□□□□ -1.61
CD44-237ENST00000534082 ARSBP15848 533 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 TNFRSF1BP20333 461 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 OTX1P32242 354 aaPredicted RBP4.99□□□□□ -1.61
CD44-237ENST00000534082 SLC7A2P52569 658 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 FAM3AP98173 230 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 FOXE3Q13461 319 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 PIN1Q13526 163 aaPredicted RBP4.99□□□□□ -1.61
CD44-237ENST00000534082 GPR50Q13585 617 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 PNLIPRP3Q17RR3 467 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 ANKDD1AQ495B1 522 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 LRIF1Q5T3J3 769 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 NANOGP8Q6NSW7 305 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 DNM1P34Q6PK57 102 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 DRAM2Q6UX65 266 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 SLC16A9Q7RTY1 509 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 ADCK1Q86TW2 530 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 ZNF561Q8N587 486 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 CD177Q8N6Q3 437 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 C5orf56Q8N8D9 126 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 RNF152Q8N8N0 203 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 C11orf65Q8NCR3 313 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 FAM156AQ8NDB6 213 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 DCUN1D4Q92564 292 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 SPSB4Q96A44 273 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 TAMM41Q96BW9 452 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 TSSK2Q96PF2 358 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 NABP2Q9BQ15 211 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 CLEC7AQ9BXN2 247 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 TXLNGYQ9BZA5 131 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 HIPK2Q9H2X6 1198 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 ZCCHC4Q9H5U6 513 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 SP140LQ9H930 580 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 NMNAT1Q9HAN9 279 aaPredicted RBP4.99□□□□□ -1.61
CD44-237ENST00000534082 SDR39U1Q9NRG7 319 aaPredicted RBP4.99□□□□□ -1.61
CD44-237ENST00000534082 CHCHD3Q9NX63 227 aaKnown RBP4.99□□□□□ -1.61
CD44-237ENST00000534082 VAPAQ9P0L0 249 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 DPM3Q9P2X0 92 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 CYB5R1Q9UHQ9 305 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 HHLA2Q9UM44 414 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 CORO2BQ9UQ03 480 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 RHBDD3Q9Y3P4 386 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 N6AMT1Q9Y5N5 214 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 TRBV5-3A0A0A0MS03 114 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 hCG_38984A0A1B0GV85 526 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 A0A1B0GVY2 172 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 HTR3EA5X5Y0 456 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 RFPL4AA6NLU0 287 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 RFPL4AL1F8VTS6 287 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 SOCS2O14508 198 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 BRI3O95415 125 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 IGHG2P01859 326 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 ELANEP08246 267 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 GPX2P18283 190 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 PI3P19957 117 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 CRABP1P29762 137 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 DCTDP32321 178 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 ZNF616Q08AN1 781 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 KIR3DS1Q14943 382 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 CYP51A1Q16850 503 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 TIGD6Q17RP2 521 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 SLC36A3Q495N2 470 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 KIAA2026Q5HYC2 2103 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 GPR139Q6DWJ6 353 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 SMARCD3Q6STE5 483 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 ZBTB49Q6ZSB9 765 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 PTCHD4Q6ZW05 846 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 CCDC80Q76M96 950 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 TCF23Q7RTU1 214 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 PATL1Q86TB9 770 aaKnown RBP4.98□□□□□ -1.61
CD44-237ENST00000534082 HAPLN4Q86UW8 402 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 IQCF2Q8IXL9 164 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 NRMQ8IXM6 262 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 KIRREL3Q8IZU9 778 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 ZNF676Q8N7Q3 588 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 OR1N2Q8NGR9 330 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 SLC26A7Q8TE54 656 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 HPSE2Q8WWQ2 592 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 ZNF714Q96N38 554 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 POLR2J2Q9GZM3 115 aaKnown RBP4.98□□□□□ -1.61
CD44-237ENST00000534082 NDEL1Q9GZM8 345 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 FGF23Q9GZV9 251 aaPredicted RBP4.98□□□□□ -1.61
CD44-237ENST00000534082 POLR2J3Q9H1A7 115 aaKnown RBP4.98□□□□□ -1.61
CD44-237ENST00000534082 TMEM133Q9H2Q1 129 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 PPCSQ9HAB8 311 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 KRCC1Q9NPI7 259 aaPredicted RBP4.98□□□□□ -1.61
CD44-237ENST00000534082 MED4Q9NPJ6 270 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 PNPOQ9NVS9 261 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 HAO1Q9UJM8 370 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 SH3GLB1Q9Y371 365 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 GMEB1Q9Y692 573 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 SESN1Q9Y6P5 492 aa4.98□□□□□ -1.61
CD44-237ENST00000534082 DMBT1Q9UGM3 2413 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms