RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 LHFPL1Q86WI0 220 aa3.6□□□□□ -1.83
SOX6-217ENST00000533870 SPNS2Q8IVW8 549 aa3.6□□□□□ -1.83
SOX6-217ENST00000533870 ZNF808Q8N4W9 903 aaPredicted RBP3.6□□□□□ -1.83
SOX6-217ENST00000533870 C11orf40Q8WZ69 217 aa3.6□□□□□ -1.83
SOX6-217ENST00000533870 MOB3AQ96BX8 217 aa3.6□□□□□ -1.83
SOX6-217ENST00000533870 IP6K3Q96PC2 410 aa3.6□□□□□ -1.83
SOX6-217ENST00000533870 TMEM222Q9H0R3 208 aa3.6□□□□□ -1.83
SOX6-217ENST00000533870 NXF5Q9H1B4 397 aaKnown RBP3.6□□□□□ -1.83
SOX6-217ENST00000533870 PRSS50Q9UI38 385 aa3.6□□□□□ -1.83
SOX6-217ENST00000533870 LY96Q9Y6Y9 160 aa3.6□□□□□ -1.83
SOX6-217ENST00000533870 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 CDC14BO60729 498 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 DEDDO75618 318 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 EIF3GO75821 320 aaKnown RBP eCLIP3.59□□□□□ -1.83
SOX6-217ENST00000533870 SCGB1D1O95968 90 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 TNFSF10P50591 281 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 IGFBP7Q16270 282 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 EXT1Q16394 746 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 SRSF7Q16629 238 aaKnown RBP eCLIP3.59□□□□□ -1.83
SOX6-217ENST00000533870 ODF4Q2M2E3 257 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 POM121L1PQ3SYA9 428 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 P4HA3Q7Z4N8 544 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 BAGE3Q86Y29 109 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 BAGE2Q86Y30 109 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 C20orf196Q8IYI0 205 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 GPBAR1Q8TDU6 330 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 MBD3L1Q8WWY6 194 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 PEX11GQ96HA9 241 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 LINC00597Q9H2U6 94 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 NCOR1P1Q9H4R4 102 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 PLEKHA3Q9HB20 300 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 TMEM167BQ9NRX6 74 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 SPANXA1Q9NS26 97 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 KCNE3Q9Y6H6 103 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 MASP2O00187 686 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 LDLRAD4O15165 306 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 PLRG1O43660 514 aaKnown RBP3.59□□□□□ -1.83
SOX6-217ENST00000533870 CYTIPO60759 359 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 CLN5O75503 358 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 TYMSP04818 313 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 GLIPR1P48060 266 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 UCP2P55851 309 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 ZNF90Q03938 601 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 SKP2Q13309 424 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 SAPCD1Q5SSQ6 148 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 SSX8Q7RTT4 187 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 SSX7Q7RTT5 188 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 ZNF573Q86YE8 665 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 DTX3Q8N9I9 347 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 LINC01555Q8NAE3 123 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 RXFP4Q8TDU9 374 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 KCNE4Q8WWG9 221 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 APOBEC3DQ96AK3 386 aaPredicted RBP3.59□□□□□ -1.83
SOX6-217ENST00000533870 SHDQ96IW2 340 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 OR2V2Q96R30 315 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 ST6GALNAC5Q9BVH7 336 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 BET1LQ9NYM9 111 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 PILRAQ9UKJ1 303 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 ANAPC10Q9UM13 185 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 ARL2-SNX15V9GYD0 113 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 MYADML2A6NDP7 307 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 A6NLC8 198 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 HSBP1O75506 76 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 SERPINA2P20848 420 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 IL2RGP31785 369 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 P2RY4P51582 365 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 SELENOVP59797 346 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 INSM1Q01101 510 aaPredicted RBP3.59□□□□□ -1.83
SOX6-217ENST00000533870 EWSR1Q01844 656 aaKnown RBP eCLIP3.59□□□□□ -1.83
SOX6-217ENST00000533870 MESTQ5EB52 335 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 FHL5Q5TD97 284 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 AAED1Q7RTV5 226 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 ZNF100Q8IYN0 542 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 OSR2Q8N2R0 312 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 NOXO1Q8NFA2 376 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 OR52B4Q8NGK2 314 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 SECTM1Q8WVN6 248 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 FRZBQ92765 325 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 GABRG3Q99928 467 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 RRAGCQ9HB90 399 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.59□□□□□ -1.83
SOX6-217ENST00000533870 SLC35D1Q9NTN3 355 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 FRRS1LQ9P0K9 344 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 LRIT1Q9P2V4 623 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 SOX21Q9Y651 276 aaPredicted RBP3.59□□□□□ -1.83
SOX6-217ENST00000533870 COL24A1Q17RW2 1714 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 TRAV8-7A0A075B6U6 113 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 C2orf72A6NCS6 295 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 ZNF207O43670 478 aaKnown RBP3.59□□□□□ -1.83
SOX6-217ENST00000533870 OR13C7P0DN81 318 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 ELNP15502 786 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 CBR1P16152 277 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 IGFBP3P17936 291 aaPredicted RBP3.59□□□□□ -1.83
SOX6-217ENST00000533870 EPHA1P21709 976 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 CCL1P22362 96 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 TAS2R60P59551 318 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 C9orf152Q5JTZ5 239 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 PHYHD1Q5SRE7 291 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 C12orf54Q6X4T0 127 aa3.59□□□□□ -1.83
SOX6-217ENST00000533870 TMEM182Q6ZP80 229 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms