RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 SLC25A37Q9NYZ2 338 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 ZIM2Q9NZV7 527 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 CYB5R1Q9UHQ9 305 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 MPC1Q9Y5U8 109 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 FAM90A18PA6NE21 464 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 FAM90A16PA6NEW6 464 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 FAM90A20PA6NIJ5 464 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 FAM90A9PA6NNJ1 464 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 ZNF850A8MQ14 1090 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 FAM90A12PA8MX19 464 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 FAM90A5PA8MXJ8 464 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 EFCAB9A8MZ26 197 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 DCTN6O00399 190 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 SOCS2O14508 198 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 TBX1O43435 398 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 FAM90A15PP0C7V4 464 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 FAM90A13PP0C7W8 464 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 FAM90A14PP0C7W9 464 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 FAM90A24PP0C7X0 464 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 HOXB9P17482 250 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-215ENST00000533818 VDAC1P21796 283 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 CRABP1P29762 137 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 OR1E2P47887 323 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 GSK3AP49840 483 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 RPL14P50914 215 aaKnown RBP8.06□□□□□ -1.12
CSDE1-215ENST00000533818 PRKXP51817 358 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 CFHR3Q02985 330 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 PRDX4Q13162 271 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 PIN1Q13526 163 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-215ENST00000533818 KIAA0141Q14154 515 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-215ENST00000533818 SMIM21Q3B7S5 101 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 DNM1P34Q6PK57 102 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 FTMTQ8N4E7 242 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 CSNK2A3Q8NEV1 391 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 OR56B4Q8NH76 319 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 TRMT10AQ8TBZ6 339 aaKnown RBP8.06□□□□□ -1.12
CSDE1-215ENST00000533818 TSEN15Q8WW01 171 aaKnown RBP8.06□□□□□ -1.12
CSDE1-215ENST00000533818 CREB3L1Q96BA8 519 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 SGK3Q96BR1 496 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 RNF183Q96D59 192 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 REEP6Q96HR9 211 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 NRIP2Q9BQI9 281 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 ELOVL1Q9BW60 279 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 FGF23Q9GZV9 251 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-215ENST00000533818 NSRP1Q9H0G5 558 aaKnown RBP8.06□□□□□ -1.12
CSDE1-215ENST00000533818 KLK15Q9H2R5 256 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 PKD1P98161 4303 aa8.06□□□□□ -1.12
CSDE1-215ENST00000533818 A0A0J9YWU9 116 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 SHISA3A0PJX4 238 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 OOSP1A8MZH6 123 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 LINC01619G3V211 115 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 BUB1B-PAK6H3BSN5 160 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 K7N7A8 449 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 MMP23AO75900 390 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 IGLV1-47P01700 117 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 PPIBP23284 216 aaKnown RBP8.05□□□□□ -1.12
CSDE1-215ENST00000533818 NOS3P29474 1203 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 GPM6AP51674 278 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 POLR2JP52435 117 aaKnown RBP8.05□□□□□ -1.12
CSDE1-215ENST00000533818 MEF2CQ06413 473 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-215ENST00000533818 LRIF1Q5T3J3 769 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 PTCHD4Q6ZW05 846 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 GDPD3Q7L5L3 318 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 TCF23Q7RTU1 214 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 ADCK1Q86TW2 530 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 RTN4RL2Q86UN3 420 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 MSRB3Q8IXL7 192 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 LINC00471Q8N535 108 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 PHLDA1Q8WV24 401 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-215ENST00000533818 UTP4Q969X6 686 aaKnown RBP8.05□□□□□ -1.12
CSDE1-215ENST00000533818 HRASLS5Q96KN8 279 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 LRGUKQ96M69 825 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 HIST1H2AAQ96QV6 131 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 PARD6BQ9BYG5 372 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 ALX4Q9H161 411 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-215ENST00000533818 ABCG5Q9H222 651 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 PLEKHA3Q9HB20 300 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 SRA1Q9HD15 236 aaKnown RBP8.05□□□□□ -1.12
CSDE1-215ENST00000533818 ABCB9Q9NP78 766 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 DNAH17Q9UFH2 4485 aa8.05□□□□□ -1.12
CSDE1-215ENST00000533818 hCG_38984A0A1B0GV85 526 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 hADV38S2A0JD32 116 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 SMIM23A6NLE4 172 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 NCBP2LA6PVI3 153 aaKnown RBP8.04□□□□□ -1.12
CSDE1-215ENST00000533818 H0Y980 276 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 LY6LH3BQJ8 138 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 TOR1AO14656 332 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 TYROBPO43914 113 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 HLA-DQA2P01906 255 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 TROVE2P10155 538 aaKnown RBP eCLIP8.04□□□□□ -1.12
CSDE1-215ENST00000533818 IDO1P14902 403 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 CDKN2AP42771 156 aaKnown RBP8.04□□□□□ -1.12
CSDE1-215ENST00000533818 ZP1P60852 638 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 EIF2B1Q14232 305 aaKnown RBP8.04□□□□□ -1.12
CSDE1-215ENST00000533818 SNCBQ16143 134 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 BAIAP2L2Q6UXY1 529 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 TIGD4Q8IY51 512 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 ASCC1Q8N9N2 400 aaKnown RBP8.04□□□□□ -1.12
CSDE1-215ENST00000533818 C11orf65Q8NCR3 313 aa8.04□□□□□ -1.12
CSDE1-215ENST00000533818 FAM156AQ8NDB6 213 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms