RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 PRSS27Q9BQR3 290 aa15.58■□□□□ 0.08
PHRF1-205ENST00000533464 MRPS18AQ9NVS2 196 aaKnown RBP15.58■□□□□ 0.08
PHRF1-205ENST00000533464 ABCD4O14678 606 aa15.58■□□□□ 0.08
PHRF1-205ENST00000533464 BGLAPP02818 100 aa15.58■□□□□ 0.08
PHRF1-205ENST00000533464 OR5AP2Q8NGF4 316 aa15.58■□□□□ 0.08
PHRF1-205ENST00000533464 RCL1Q9Y2P8 373 aaKnown RBP15.58■□□□□ 0.08
PHRF1-205ENST00000533464 MRGPREQ86SM8 312 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 PLPPR2Q96GM1 343 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 AQP7O14520 342 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 SCO1O75880 301 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 CCL3P10147 92 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 MGST1P10620 155 aaKnown RBP15.57■□□□□ 0.08
PHRF1-205ENST00000533464 SUB1P53999 127 aaKnown RBP eCLIP15.57■□□□□ 0.08
PHRF1-205ENST00000533464 NHLRC1Q6VVB1 395 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 C15orf54Q8N8G6 183 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 ZNF721Q8TF20 911 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 PATZ1Q9HBE1 687 aaKnown RBP15.57■□□□□ 0.08
PHRF1-205ENST00000533464 ALPK2Q86TB3 2170 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 SCN10AQ9Y5Y9 1956 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 HSBP1L1C9JCN9 74 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 SPRY3O43610 288 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 TRIP6Q15654 476 aaKnown RBP15.57■□□□□ 0.08
PHRF1-205ENST00000533464 ZNF485Q8NCK3 441 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 SLC35E1Q96K37 410 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 PRRX2Q99811 253 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 WFDC6Q9BQY6 131 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 TRAV8-7A0A075B6U6 113 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 LIMK1P53667 647 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 TMEM41BQ5BJD5 291 aa15.57■□□□□ 0.08
PHRF1-205ENST00000533464 TUBAL3A6NHL2 446 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 ZIC2O95409 532 aaPredicted RBP15.56■□□□□ 0.08
PHRF1-205ENST00000533464 S100A7P31151 101 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 GSK3AP49840 483 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 NDUFA6P56556 154 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 ZNF816Q0VGE8 651 aaPredicted RBP15.56■□□□□ 0.08
PHRF1-205ENST00000533464 FUT5Q11128 374 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 BATFQ16520 125 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 RTL8BQ17RB0 113 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 NAA40Q86UY6 237 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 TUBG2Q9NRH3 451 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 GAB2Q9UQC2 676 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 PDCD6O75340 191 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 CRYABP02511 175 aaKnown RBP15.56■□□□□ 0.08
PHRF1-205ENST00000533464 SELENOPP49908 381 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 Q8IYB0 196 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 FAM58AQ8N1B3 248 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 OR2Z1Q8NG97 314 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 ZPLD1Q8TCW7 415 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 BTF3L4Q96K17 158 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 TMEM30CPA0ZSE6 113 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 C9orf170A2RU37 121 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 CLEC18AA5D8T8 446 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 AANATQ16613 207 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 SPICQ8N5J4 248 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 CLEC18CQ8NCF0 446 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 CLDN23Q96B33 292 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 CIB3Q96Q77 187 aaPredicted RBP15.56■□□□□ 0.08
PHRF1-205ENST00000533464 HPP00738 406 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 LSM6P62312 80 aaKnown RBP15.56■□□□□ 0.08
PHRF1-205ENST00000533464 ST6GAL2Q96JF0 529 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 NDRG3Q9UGV2 375 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 LAMP3Q9UQV4 416 aa15.56■□□□□ 0.08
PHRF1-205ENST00000533464 PLA2G10O15496 165 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 GALR2O43603 387 aaPredicted RBP15.55■□□□□ 0.08
PHRF1-205ENST00000533464 LYZL6O75951 148 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 SFT2D2O95562 160 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 CLLU1Q5K131 121 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 MRPS24Q96EL2 167 aaKnown RBP15.55■□□□□ 0.08
PHRF1-205ENST00000533464 COMMD5Q9GZQ3 224 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 ERRFI1Q9UJM3 462 aaPredicted RBP15.55■□□□□ 0.08
PHRF1-205ENST00000533464 PARP14Q460N5 1801 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 TSTD3H0UI37 97 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 KRASP01116 189 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 ZNF79Q15937 498 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 CMTM2Q8TAZ6 248 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 ERGIC1Q969X5 290 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 SIPA1L1O43166 1804 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 MEX3AA1L020 520 aaKnown RBP15.55■□□□□ 0.08
PHRF1-205ENST00000533464 SIRT4Q9Y6E7 314 aaPredicted RBP15.55■□□□□ 0.08
PHRF1-205ENST00000533464 SPTBP11277 2137 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 CTDSPLO15194 276 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 NGFP01138 241 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 RAB4AP20338 218 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 GFRALQ6UXV0 394 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 ASB5Q8WWX0 329 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 UCN2Q96RP3 112 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 RAB18Q9NP72 206 aa15.55■□□□□ 0.08
PHRF1-205ENST00000533464 TMEM265A0A087WTH1 108 aa15.54■□□□□ 0.08
PHRF1-205ENST00000533464 EPOPA6NHQ4 379 aa15.54■□□□□ 0.08
PHRF1-205ENST00000533464 ZNF727A8MUV8 499 aa15.54■□□□□ 0.08
PHRF1-205ENST00000533464 ATP6V1G2-DDX39BF2Z307 99 aa15.54■□□□□ 0.08
PHRF1-205ENST00000533464 GSTZ1O43708 216 aaPredicted RBP15.54■□□□□ 0.08
PHRF1-205ENST00000533464 OR2C1O95371 312 aa15.54■□□□□ 0.08
PHRF1-205ENST00000533464 FOXC1Q12948 553 aa15.54■□□□□ 0.08
PHRF1-205ENST00000533464 COL13A1Q5TAT6 717 aaPredicted RBP15.54■□□□□ 0.08
PHRF1-205ENST00000533464 RXFP4Q8TDU9 374 aa15.54■□□□□ 0.08
PHRF1-205ENST00000533464 ZNF501Q96CX3 271 aaPredicted RBP15.54■□□□□ 0.08
PHRF1-205ENST00000533464 TRMT61AQ96FX7 289 aaKnown RBP15.54■□□□□ 0.08
PHRF1-205ENST00000533464 H7BYZ3 331 aa15.54■□□□□ 0.08
PHRF1-205ENST00000533464 ZNF83P51522 516 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms