RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 OR13F1Q8NGS4 319 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 LRRC29Q8WV35 223 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 OR5P3Q8WZ94 311 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 HIST1H2AAQ96QV6 131 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 OR5M11Q96RB7 305 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 NUP50Q9UKX7 468 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 SMIM31A0A1B0GVY4 71 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 TNFRSF13BO14836 293 aaPredicted RBP13.86□□□□□ -0.19
PKP3-209ENST00000533069 ADAM20O43506 726 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 ENSAO43768 121 aaKnown RBP13.86□□□□□ -0.19
PKP3-209ENST00000533069 IGLV3-1P01715 115 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 HSMCR30P0CW71 290 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 GALP22466 123 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 MICBQ29980 383 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 C11orf91Q3C1V1 193 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 WDR82Q6UXN9 313 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 FAM90A1Q86YD7 464 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 MS4A15Q8N5U1 240 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 OR10Z1Q8NGY1 313 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 PIGCQ92535 297 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 C12orf43Q96C57 262 aaKnown RBP13.86□□□□□ -0.19
PKP3-209ENST00000533069 SMIM19Q96E16 107 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 TECTBQ96PL2 329 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 SLC6A7Q99884 636 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 BCL7BQ9BQE9 202 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 NUDT16L1Q9BRJ7 211 aaKnown RBP13.86□□□□□ -0.19
PKP3-209ENST00000533069 TTTY10Q9BZA0 68 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 PPP1R3EQ9H7J1 279 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 ISG20L2Q9H9L3 353 aaKnown RBP13.86□□□□□ -0.19
PKP3-209ENST00000533069 ACOXLQ9NUZ1 547 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 KAAG1Q9UBP8 84 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 CTSZQ9UBR2 303 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 R4GMQ9 66 aa13.86□□□□□ -0.19
PKP3-209ENST00000533069 TMEM212A6NML5 194 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 LOC110117498-PIK3R3F6TDL0 507 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 CDIPTO14735 213 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 OGG1O15527 345 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 MTRF1O75570 445 aaKnown RBP13.85□□□□□ -0.19
PKP3-209ENST00000533069 INMTO95050 263 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 SERPINA3P01011 423 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 EGR1P18146 543 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 HOXA4Q00056 320 aaPredicted RBP13.85□□□□□ -0.19
PKP3-209ENST00000533069 MFGE8Q08431 387 aaPredicted RBP13.85□□□□□ -0.19
PKP3-209ENST00000533069 CDK5R1Q15078 307 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 FAM76BQ5HYJ3 339 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 KLF17Q5JT82 389 aaPredicted RBP13.85□□□□□ -0.19
PKP3-209ENST00000533069 BCL2L15Q5TBC7 163 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 CCDC54Q8NEL0 328 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 OR51E1Q8TCB6 317 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 RPS4Y2Q8TD47 263 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 HPSE2Q8WWQ2 592 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 UPRTQ96BW1 309 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 RNF170Q96K19 258 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 OPALINQ96PE5 141 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 COMMD4Q9H0A8 199 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 GPR84Q9NQS5 396 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 NDUFB11Q9NX14 153 aa13.85□□□□□ -0.19
PKP3-209ENST00000533069 SRRM5B3KS81 715 aa13.84□□□□□ -0.19
PKP3-209ENST00000533069 TRIM77I1YAP6 450 aa13.84□□□□□ -0.19
PKP3-209ENST00000533069 SRSF10O75494 262 aaKnown RBP13.84□□□□□ -0.19
PKP3-209ENST00000533069 DHRS3O75911 302 aa13.84□□□□□ -0.19
PKP3-209ENST00000533069 RGS9O75916 674 aaPredicted RBP13.84□□□□□ -0.19
PKP3-209ENST00000533069 GYPAP02724 150 aa13.84□□□□□ -0.19
PKP3-209ENST00000533069 LIPFP07098 398 aa13.84□□□□□ -0.19
PKP3-209ENST00000533069 GABRA5P31644 462 aa13.84□□□□□ -0.19
PKP3-209ENST00000533069 GP2P55259 537 aaKnown RBP13.84□□□□□ -0.19
PKP3-209ENST00000533069 RIPPLY1Q0D2K3 151 aa13.84□□□□□ -0.19
PKP3-209ENST00000533069 ALKBH1Q13686 389 aaKnown RBP13.84□□□□□ -0.19
PKP3-209ENST00000533069 CEACAM21Q3KPI0 293 aa13.84□□□□□ -0.19
PKP3-209ENST00000533069 DMKNQ6E0U4 476 aaPredicted RBP13.84□□□□□ -0.19
PKP3-209ENST00000533069 RBMS3Q6XE24 437 aaKnown RBP13.84□□□□□ -0.19
PKP3-209ENST00000533069 GDPGP1Q6ZNW5 385 aa13.84□□□□□ -0.19
PKP3-209ENST00000533069 FAM71F1Q96KD3 344 aaPredicted RBP13.84□□□□□ -0.19
PKP3-209ENST00000533069 ENPP5Q9UJA9 477 aa13.84□□□□□ -0.19
PKP3-209ENST00000533069 TRBV2A0A0J9YWF9 115 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 OR5B21A6NL26 309 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 C22orf46C9J442 243 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.83□□□□□ -0.2
PKP3-209ENST00000533069 TMPRSS2O15393 492 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 NOL3O60936 208 aaKnown RBP13.83□□□□□ -0.2
PKP3-209ENST00000533069 TTRP02766 147 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 UBCP0CG48 685 aaKnown RBP13.83□□□□□ -0.2
PKP3-209ENST00000533069 CELP19835 753 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 GNG3P63215 75 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 TUSC1Q2TAM9 212 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 YIF1BQ5BJH7 314 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 SLC36A1Q7Z2H8 476 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 ELMOD2Q8IZ81 293 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.83□□□□□ -0.2
PKP3-209ENST00000533069 PNLDC1Q8NA58 520 aaKnown RBP13.83□□□□□ -0.2
PKP3-209ENST00000533069 OR2G2Q8NGZ5 317 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 FAM216AQ8WUB2 273 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 PHYHIPQ92561 330 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 FAM192AQ9GZU8 254 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 OR52A1Q9UKL2 312 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 GTF2A1LQ9UNN4 478 aa13.83□□□□□ -0.2
PKP3-209ENST00000533069 ANK2Q01484 3957 aa13.82□□□□□ -0.2
PKP3-209ENST00000533069 IGHV3OR15-7A0A075B7D8 119 aa13.82□□□□□ -0.2
PKP3-209ENST00000533069 DHRS7CA6NNS2 312 aa13.82□□□□□ -0.2
PKP3-209ENST00000533069 ZNF701M0R085 212 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms