RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 APOFQ13790 326 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 TMEM255AQ5JRV8 349 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 LCN1P1Q5VSP4 162 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 C12orf73Q69YU5 71 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 DRAM2Q6UX65 266 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 FBXW12Q6X9E4 464 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 SLC16A9Q7RTY1 509 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 DPY19L4Q7Z388 723 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 NAA40Q86UY6 237 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR5AS1Q8N127 324 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 CBR4Q8N4T8 237 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF283Q8N7M2 679 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 TCEANCQ8N8B7 351 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR2Z1Q8NG97 314 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 WIPF2Q8TF74 440 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 THEM6Q8WUY1 208 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 RNF133Q8WVZ7 376 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF582Q96NG8 517 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 IL4I1Q96RQ9 567 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 TEAD3Q99594 435 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 ASCL2Q99929 193 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 SPAG8Q99932 426 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 PCGF1Q9BSM1 259 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 GABARAPL3Q9BY60 117 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 PKIBQ9C010 78 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 BPESC1Q9GZL8 116 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 PPIL3Q9H2H8 161 aaKnown RBP4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 TOR3AQ9H497 397 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 MARCH7Q9H992 704 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 GPR132Q9UNW8 380 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 N6AMT1Q9Y5N5 214 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 SIRT4Q9Y6E7 314 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 USF3Q68DE3 2245 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 F8P00451 2351 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 HIVEP1P15822 2718 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 ITPR3Q14573 2671 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 A0A096LNT2 108 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 IGHV4-61A0A0C4DH41 118 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 CCDC182A6NF36 153 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 M0R129 80 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 AP4M1O00189 453 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 PPIHO43447 177 aaKnown RBP4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 RP2O75695 350 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 NXPH3O95157 252 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 ALPLP05186 524 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 CD55P08174 381 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 MRPL3P09001 348 aaKnown RBP4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 SLC2A1P11166 492 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 ALOX5APP20292 161 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 SLC2A5P22732 501 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 OTX1P32242 354 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 OPRL1P41146 370 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 GPR6P46095 362 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 CX3CR1P49238 355 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 TMEM33P57088 247 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 CDC42P60953 191 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 TNFAIP6P98066 277 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 NHLH2Q02577 135 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 GK2Q14410 553 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 RNF151Q2KHN1 245 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 TMEM249Q2WGJ8 235 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 SNAI3Q3KNW1 292 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 TMEM41BQ5BJD5 291 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 NXNL2Q5VZ03 156 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR2T2Q6IF00 324 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 Q6ZR03 302 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 PGAP1Q75T13 922 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 RHOUQ7L0Q8 258 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 MEPCEQ7L2J0 689 aaKnown RBP4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 MRPL21Q7Z2W9 205 aaKnown RBP4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 BCDIN3DQ7Z5W3 292 aaKnown RBP4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 RTN4RL2Q86UN3 420 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 GID4Q8IVV7 300 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 CADM3Q8N126 398 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 BHLHE23Q8NDY6 225 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR8G5Q8NG78 346 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR52H1Q8NGJ2 320 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR8J1Q8NGP2 316 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR13G1Q8NGZ3 307 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 OTOSQ8NHW6 89 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 TMEM163Q8TC26 289 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 SPRYD4Q8WW59 207 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 CCL17Q92583 94 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 YIPF5Q969M3 257 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 EME1Q96AY2 570 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 AMELYQ99218 206 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 CNN2Q99439 309 aaKnown RBP4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 C9orf16Q9BUW7 83 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 YIPF3Q9GZM5 350 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 VCX2Q9H322 139 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 SP140LQ9H930 580 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF275Q9NSD4 429 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 TMEM100Q9NV29 134 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 IMPAD1Q9NX62 359 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 USE1Q9NZ43 259 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 DNAJC27Q9NZQ0 273 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 FOXA2Q9Y261 457 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 TMEM14AQ9Y6G1 99 aa4.88□□□□□ -1.63
HMGB1P42-201ENST00000532126 TRGV11A0A075B6L2 103 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms