RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 DNAH9Q9NYC9 4486 aa7.42□□□□□ -1.22
NEDD8-206ENST00000531430 RIIAD1A6NNX1 92 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 VGLL3A8MV65 326 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 MTRF1O75570 445 aaKnown RBP7.41□□□□□ -1.22
NEDD8-206ENST00000531430 NXPH2O95156 264 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 SOX14O95416 240 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 TK1P04183 234 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 DCTDP32321 178 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 OPRL1P41146 370 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 RAB25P57735 213 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 ESRRGP62508 458 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 SMIM21Q3B7S5 101 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 CEACAM21Q3KPI0 293 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 ABCA11PQ4W5N1 156 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 TCTEX1D4Q5JR98 221 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 C10orf99Q6UWK7 81 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 ASCC1Q8N9N2 400 aaKnown RBP7.41□□□□□ -1.22
NEDD8-206ENST00000531430 OR5A2Q8NGI9 324 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 OR8D4Q8NGM9 314 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 OR4Q3Q8NH05 313 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 WIPF2Q8TF74 440 aaPredicted RBP7.41□□□□□ -1.22
NEDD8-206ENST00000531430 RNF133Q8WVZ7 376 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 AQP3Q92482 292 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 ARMC1Q9NVT9 282 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 CD300AQ9UGN4 299 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 LYVE1Q9Y5Y7 322 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 U3KQK5 164 aa7.41□□□□□ -1.22
NEDD8-206ENST00000531430 C17orf98A8MV24 154 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 NUDT19A8MXV4 375 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 PSMD9O00233 223 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 CCDC22O60826 627 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 CCNB2O95067 398 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 LYNP07948 512 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 ZNF728P0DKX0 622 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 ZNF3P17036 446 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 LMO1P25800 156 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 HAAOP46952 286 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 HCCSP53701 268 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 ACTA2P62736 377 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 ACTG2P63267 376 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 ACTC1P68032 377 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 ACTA1P68133 377 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 RIPPLY1Q0D2K3 151 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 EDDM3AQ14507 147 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 LDLRAD2Q5SZI1 272 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 LCN8Q6JVE9 175 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 CGB2Q6NT52 195 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 RASSF6Q6ZTQ3 369 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 ASRGL1Q7L266 308 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 GDPD3Q7L5L3 318 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 HDXQ7Z353 690 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 KRT77Q7Z794 578 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 ZNF676Q8N7Q3 588 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 OR2T33Q8NG76 320 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 OR8B12Q8NGG6 310 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 NSMCE2Q96MF7 247 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 GPR61Q9BZJ8 451 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 VIPAS39Q9H9C1 493 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 IL20Q9NYY1 176 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 GTF2A1LQ9UNN4 478 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 PIGLQ9Y2B2 252 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 LRP12Q9Y561 859 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 DNAH3Q8TD57 4116 aa7.4□□□□□ -1.22
NEDD8-206ENST00000531430 A6NIN4 97 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 OR5B21A6NL26 309 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 H3BN98 237 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 SELENOFO60613 162 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 KRT36O76013 467 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 NRASP01111 189 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 NHLRC4P0CG21 123 aaPredicted RBP7.39□□□□□ -1.23
NEDD8-206ENST00000531430 IGHV1-8P0DP01 117 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 RPS7P62081 194 aaKnown RBP7.39□□□□□ -1.23
NEDD8-206ENST00000531430 DGCR2P98153 550 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 COL10A1Q03692 680 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 KLHL22Q53GT1 634 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 ZNF684Q5T5D7 378 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 LINC01590Q5TEZ4 76 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 ZNF626Q68DY1 528 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 C8orf82Q6P1X6 216 aaPredicted RBP7.39□□□□□ -1.23
NEDD8-206ENST00000531430 KCTD18Q6PI47 426 aaPredicted RBP7.39□□□□□ -1.23
NEDD8-206ENST00000531430 ZNF329Q86UD4 541 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 CALHM1Q8IU99 346 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 MRPL41Q8IXM3 137 aaKnown RBP7.39□□□□□ -1.23
NEDD8-206ENST00000531430 IQCF1Q8N6M8 205 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 AQP11Q8NBQ7 271 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 POC1AQ8NBT0 407 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 OR51D1Q8NGF3 324 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 TRMT10AQ8TBZ6 339 aaKnown RBP7.39□□□□□ -1.23
NEDD8-206ENST00000531430 AKR1E2Q96JD6 320 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 BTBD10Q9BSF8 475 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 NMNAT2Q9BZQ4 307 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 NIPAL2Q9H841 368 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 GORASP2Q9H8Y8 452 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 SPAG4Q9NPE6 437 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 GPR173Q9NS66 373 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 BAIAP2Q9UQB8 552 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 SLC22A13Q9Y226 551 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 U3KQV3 271 aa7.39□□□□□ -1.23
NEDD8-206ENST00000531430 TMEM269A0A1B0GVZ9 245 aa7.38□□□□□ -1.23
NEDD8-206ENST00000531430 ODF3BA8MYP8 253 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms