RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 C11orf53Q8IXP5 236 aa16.12■□□□□ 0.17
SMPD1-205ENST00000531303 OR51D1Q8NGF3 324 aa16.12■□□□□ 0.17
SMPD1-205ENST00000531303 OR10K1Q8NGX5 313 aa16.12■□□□□ 0.17
SMPD1-205ENST00000531303 OR51F2Q8NH61 342 aa16.12■□□□□ 0.17
SMPD1-205ENST00000531303 SLC25A28Q96A46 364 aa16.12■□□□□ 0.17
SMPD1-205ENST00000531303 ZNF488Q96MN9 340 aa16.12■□□□□ 0.17
SMPD1-205ENST00000531303 S100A13Q99584 98 aa16.12■□□□□ 0.17
SMPD1-205ENST00000531303 LIME1Q9H400 295 aa16.12■□□□□ 0.17
SMPD1-205ENST00000531303 SAP30LQ9HAJ7 183 aa16.12■□□□□ 0.17
SMPD1-205ENST00000531303 LIN7BQ9HAP6 207 aa16.12■□□□□ 0.17
SMPD1-205ENST00000531303 J3QT63 122 aa16.11■□□□□ 0.17
SMPD1-205ENST00000531303 CDC14BO60729 498 aa16.11■□□□□ 0.17
SMPD1-205ENST00000531303 CD55P08174 381 aa16.11■□□□□ 0.17
SMPD1-205ENST00000531303 ADH4P08319 380 aa16.11■□□□□ 0.17
SMPD1-205ENST00000531303 CALCBP10092 127 aa16.11■□□□□ 0.17
SMPD1-205ENST00000531303 PCGF3Q3KNV8 242 aa16.11■□□□□ 0.17
SMPD1-205ENST00000531303 SLC22A6Q4U2R8 563 aa16.11■□□□□ 0.17
SMPD1-205ENST00000531303 FAM209AQ5JX71 171 aa16.11■□□□□ 0.17
SMPD1-205ENST00000531303 FAM166AQ6J272 317 aa16.11■□□□□ 0.17
SMPD1-205ENST00000531303 AQP3Q92482 292 aa16.11■□□□□ 0.17
SMPD1-205ENST00000531303 FAM3DQ96BQ1 224 aa16.11■□□□□ 0.17
SMPD1-205ENST00000531303 CCL19Q99731 98 aa16.11■□□□□ 0.17
SMPD1-205ENST00000531303 RAB1BQ9H0U4 201 aa16.11■□□□□ 0.17
SMPD1-205ENST00000531303 IGKV1-12A0A0C4DH73 117 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 CYB5AP00167 134 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 IGKV1D-12P01611 117 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 HPXP02790 462 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 ARSBP15848 533 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 KRTAP10-9P60411 292 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 RIN1Q13671 783 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 RSU1Q15404 277 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 C2orf76Q3KRA6 126 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 OR10K2Q6IF99 312 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 CELF2-AS1Q8N7Q2 184 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 BOLLQ8N9W6 283 aaKnown RBP16.1■□□□□ 0.17
SMPD1-205ENST00000531303 MCFD2Q8NI22 146 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 SLIRPQ9GZT3 109 aaKnown RBP16.1■□□□□ 0.17
SMPD1-205ENST00000531303 FN3KRPQ9HA64 309 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 COMMD3Q9UBI1 195 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 FBXO9Q9UK97 447 aaPredicted RBP16.1■□□□□ 0.17
SMPD1-205ENST00000531303 HTR3BO95264 441 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 TNFRSF1AP19438 455 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 BCL3P20749 454 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 PMELP40967 661 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 HOXA4Q00056 320 aaPredicted RBP16.1■□□□□ 0.17
SMPD1-205ENST00000531303 TESK1Q15569 626 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 TGIF2LYQ8IUE0 185 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 MKXQ8IYA7 352 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 OR5H6Q8NGV6 325 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 LGALS14Q8TCE9 139 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 AP3S1Q92572 193 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 FAM46BQ96A09 425 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 PKIBQ9C010 78 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 C6orf62Q9GZU0 229 aaPredicted RBP16.1■□□□□ 0.17
SMPD1-205ENST00000531303 METTL9Q9H1A3 318 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 SMURF1Q9HCE7 757 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 GCM1Q9NP62 436 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 MTCH1Q9NZJ7 389 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 OR5V1Q9UGF6 321 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 PPP1R3CQ9UQK1 317 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 CACNG2Q9Y698 323 aa16.1■□□□□ 0.17
SMPD1-205ENST00000531303 A0A1W2PP11 408 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 TRAPPC2LH3BP13 241 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 AKR7A2O43488 359 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 LY6HO94772 140 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 SERPINA2P20848 420 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 NPBWR2P48146 333 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 IL24Q13007 206 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 PLA2G7Q13093 441 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 ZNF404Q494X3 552 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 WDR82Q6UXN9 313 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 LRRC29Q8WV35 223 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 GAL3ST1Q99999 423 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 TLNRD1Q9H1K6 362 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 BANF2Q9H503 90 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 POLDIP2Q9Y2S7 368 aa16.09■□□□□ 0.17
SMPD1-205ENST00000531303 TMEM272A0A1B0GTI8 110 aa16.08■□□□□ 0.16
SMPD1-205ENST00000531303 F8VVB4 439 aa16.08■□□□□ 0.16
SMPD1-205ENST00000531303 F8VWA3 439 aa16.08■□□□□ 0.16
SMPD1-205ENST00000531303 LYNX1G3V0Z9 82 aa16.08■□□□□ 0.16
SMPD1-205ENST00000531303 PTBP3O95758 552 aaKnown RBP16.08■□□□□ 0.16
SMPD1-205ENST00000531303 BPNT1O95861 308 aa16.08■□□□□ 0.16
SMPD1-205ENST00000531303 SFTPBP07988 381 aa16.08■□□□□ 0.16
SMPD1-205ENST00000531303 LYNX1P0DP58 116 aa16.08■□□□□ 0.16
SMPD1-205ENST00000531303 MPZP25189 248 aa16.08■□□□□ 0.16
SMPD1-205ENST00000531303 GATA4P43694 442 aa16.08■□□□□ 0.16
SMPD1-205ENST00000531303 SNU13P55769 128 aaKnown RBP16.08■□□□□ 0.16
SMPD1-205ENST00000531303 METAP1DQ6UB28 335 aaPredicted RBP16.08■□□□□ 0.16
SMPD1-205ENST00000531303 ZSCAN4Q8NAM6 433 aaPredicted RBP16.08■□□□□ 0.16
SMPD1-205ENST00000531303 PXT1Q8NFP0 134 aa16.08■□□□□ 0.16
SMPD1-205ENST00000531303 TBC1D15Q8TC07 691 aa16.08■□□□□ 0.16
SMPD1-205ENST00000531303 DCAF16Q9NXF7 216 aa16.08■□□□□ 0.16
SMPD1-205ENST00000531303 ABRACLQ9P1F3 81 aa16.08■□□□□ 0.16
SMPD1-205ENST00000531303 WNT9BO14905 357 aa16.07■□□□□ 0.16
SMPD1-205ENST00000531303 NDUFS7O75251 213 aa16.07■□□□□ 0.16
SMPD1-205ENST00000531303 CRTAPO75718 401 aaPredicted RBP16.07■□□□□ 0.16
SMPD1-205ENST00000531303 CYB5R3P00387 301 aaPredicted RBP16.07■□□□□ 0.16
SMPD1-205ENST00000531303 VSIG8P0DPA2 414 aa16.07■□□□□ 0.16
SMPD1-205ENST00000531303 CFPP27918 469 aa16.07■□□□□ 0.16
SMPD1-205ENST00000531303 BMXP51813 675 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms