RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SF3B6Q9Y3B4 125 aaKnown RBP12.88□□□□□ -0.35
CPSF1-205ENST00000531042 RFPL4AA6NLU0 287 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 LOC110117498-PIK3R3F6TDL0 507 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 RFPL4AL1F8VTS6 287 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 M0R129 80 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 SYNGR1O43759 233 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 PGA5P0DJD9 388 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 CAPZA1P52907 286 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 CXCR4P61073 352 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 EFNB1P98172 346 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 SMIM21Q3B7S5 101 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 AADACL4Q5VUY2 407 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 NXNL2Q5VZ03 156 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 TMEM42Q69YG0 159 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 SLC35E4Q6ICL7 350 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 ZNF322Q6U7Q0 402 aaPredicted RBP12.87□□□□□ -0.35
CPSF1-205ENST00000531042 ZNF573Q86YE8 665 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 SLC35F2Q8IXU6 374 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 OR5K1Q8NHB7 308 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 C17orf50Q8WW18 174 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 AJUBAQ96IF1 538 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 MNTQ99583 582 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 PRRG3Q9BZD7 231 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 PPA2Q9H2U2 334 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 MOB1AQ9H8S9 216 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 ADGRL4Q9HBW9 690 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 C19orf12Q9NSK7 152 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 H2AFY2Q9P0M6 372 aaPredicted RBP12.87□□□□□ -0.35
CPSF1-205ENST00000531042 GTF2A1LQ9UNN4 478 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 V9GYS6 101 aa12.87□□□□□ -0.35
CPSF1-205ENST00000531042 A0A1B0GTI1 187 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 ANKRD61A6NGH8 418 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 SLC22A31A6NKX4 558 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 H3BUX3 64 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 J3QT63 122 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 DLGAP1O14490 977 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 MAGEB4O15481 346 aaPredicted RBP12.86□□□□□ -0.35
CPSF1-205ENST00000531042 ANGPTL7O43827 346 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 MITFO75030 526 aaPredicted RBP12.86□□□□□ -0.35
CPSF1-205ENST00000531042 NOS1APO75052 506 aaPredicted RBP12.86□□□□□ -0.35
CPSF1-205ENST00000531042 EPHA2P29317 976 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 PRDX2P32119 198 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 HAAOP46952 286 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 ACTR3P61158 418 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 CLVS2Q5SYC1 327 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 BCL2L15Q5TBC7 163 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 SLX4IPQ5VYV7 408 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 MKXQ8IYA7 352 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 ELMOD2Q8IZ81 293 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 ZNF561Q8N587 486 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 TCEANCQ8N8B7 351 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 TMEM163Q8TC26 289 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 UBE2FQ969M7 185 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 SSX3Q99909 188 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 MEGF9Q9H1U4 602 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 GPR173Q9NS66 373 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 KRT84Q9NSB2 600 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 OR52A1Q9UKL2 312 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 R4GMQ9 66 aa12.86□□□□□ -0.35
CPSF1-205ENST00000531042 PQLC2LA1A4F0 135 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 ZAR1LA6NP61 321 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 SLC1A7O00341 560 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 RPL31P62899 125 aaKnown RBP12.85□□□□□ -0.35
CPSF1-205ENST00000531042 EGR3Q06889 387 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 C12orf73Q69YU5 71 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 TMEM200BQ69YZ2 307 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 PLEKHG7Q6ZR37 379 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 Q6ZSR3 168 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 C11orf42Q8N5U0 333 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 OR51G2Q8NGK0 314 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 OR14K1Q8NGZ2 314 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 BCAS4Q8TDM0 211 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 RORBQ92753 470 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 NRIP2Q9BQI9 281 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 CADM1Q9BY67 442 aaKnown RBP12.85□□□□□ -0.35
CPSF1-205ENST00000531042 FAM234AQ9H0X4 552 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 HES4Q9HCC6 221 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 CLN6Q9NWW5 311 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.85□□□□□ -0.35
CPSF1-205ENST00000531042 FBLN5Q9UBX5 448 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 MRM2Q9UI43 246 aaKnown RBP12.85□□□□□ -0.35
CPSF1-205ENST00000531042 POLDIP2Q9Y2S7 368 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 SNX5Q9Y5X3 404 aa12.85□□□□□ -0.35
CPSF1-205ENST00000531042 A0A1W2PPH5 198 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 A6NIN4 97 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 DHRS7CA6NNS2 312 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 ZNF670-ZNF695F2Z2N8 137 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 G3V2T6 193 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 NXPH2O95156 264 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 TSPAN15O95858 294 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 MPZP25189 248 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 CEBPDP49716 269 aaPredicted RBP12.84□□□□□ -0.35
CPSF1-205ENST00000531042 ATP6AP1Q15904 470 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 LRRC75BQ2VPJ9 315 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 ASRGL1Q7L266 308 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 OR4M1Q8NGD0 313 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 PPP1R35Q8TAP8 253 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 HEXA-AS1Q9H8Q6 139 aa12.84□□□□□ -0.35
CPSF1-205ENST00000531042 PAX6P26367 422 aa12.83□□□□□ -0.36
CPSF1-205ENST00000531042 GABRA5P31644 462 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms