RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 ARV1Q9H2C2 271 aa0.74□□□□□ -2.29
NUP98-218ENST00000530516 CCNB1IP1Q9NPC3 277 aa0.74□□□□□ -2.29
NUP98-218ENST00000530516 GCNT4Q9P109 453 aa0.74□□□□□ -2.29
NUP98-218ENST00000530516 HPCAL4Q9UM19 191 aa0.74□□□□□ -2.29
NUP98-218ENST00000530516 ACOT9Q9Y305 439 aa0.74□□□□□ -2.29
NUP98-218ENST00000530516 STRCP1A6NGW2 1772 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 SETD1AO15047 1707 aaKnown RBP0.73□□□□□ -2.29
NUP98-218ENST00000530516 TRAV8-6A0A0B4J262 113 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 A0A0B4J2C4 111 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 TRGV4A0A0C4DH28 118 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 SLC31A1O15431 190 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 CACNG3O60359 315 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 IGKV1D-33P01593 117 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 IGKV1-33P01594 117 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 CCL23P55773 120 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 MERTKQ12866 999 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 Q6ZQT7 251 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 CPNE9Q8IYJ1 553 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 C8orf31Q8N9H6 132 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 OR10D4PQ8NGN7 298 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 OR8S1Q8NH09 359 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 ITFG1Q8TB96 612 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 RAD51AP1Q96B01 352 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 RCN3Q96D15 328 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 OR51B5Q9H339 312 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 ABCB9Q9NP78 766 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 MCUBQ9NWR8 336 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 MYEF2Q9P2K5 600 aaKnown RBP0.73□□□□□ -2.29
NUP98-218ENST00000530516 CHTOPQ9Y3Y2 248 aaKnown RBP0.73□□□□□ -2.29
NUP98-218ENST00000530516 TRAPPC1Q9Y5R8 145 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 ADGRB3O60242 1522 aa0.73□□□□□ -2.29
NUP98-218ENST00000530516 MROH5Q6ZUA9 1318 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 GOLGA8JA6NMD2 632 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 A8MWP4 228 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 G3V3Q6 166 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 UPK1BO75841 260 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 AGTP01019 485 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 OR4Q2P0C623 313 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 GOLGA8HP0CJ92 632 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 HLA-GP17693 338 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 PAX6P26367 422 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 SPANXN2Q5MJ10 180 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 KCTD16Q68DU8 428 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 TMEM53Q6P2H8 277 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 CYHR1Q6ZMK1 362 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 NDUFAF7Q7L592 441 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 SSX9Q7RTT3 188 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 FAM122BQ7Z309 247 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 LUZP2Q86TE4 346 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 AMN1Q8IY45 258 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 ZFP82Q8N141 532 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 C3orf22Q8N5N4 141 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 OR2K2Q8NGT1 345 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 OR5H2Q8NGV7 314 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.72□□□□□ -2.29
NUP98-218ENST00000530516 MCUR1Q96AQ8 359 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 THTPAQ9BU02 230 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 CD209Q9NNX6 404 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 C20orf96Q9NUD7 363 aaPredicted RBP0.72□□□□□ -2.29
NUP98-218ENST00000530516 KLF13Q9Y2Y9 288 aaPredicted RBP0.72□□□□□ -2.29
NUP98-218ENST00000530516 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
NUP98-218ENST00000530516 IGKV1D-37A0A075B6S9 117 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 GMNCA6NCL1 334 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 UPK1AO00322 258 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 MPHOSPH10O00566 681 aaKnown RBP0.71□□□□□ -2.3
NUP98-218ENST00000530516 XRCC2O43543 280 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 MPDU1O75352 247 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 CGB3P0DN86 165 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 CGB7P0DN87 165 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 PTHLHP12272 177 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 GFAPP14136 432 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 ZNF22P17026 224 aaPredicted RBP0.71□□□□□ -2.3
NUP98-218ENST00000530516 GZMHP20718 246 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 GSTM3P21266 225 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 COILP38432 576 aaPredicted RBP0.71□□□□□ -2.3
NUP98-218ENST00000530516 NUDT2P50583 147 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 HMGN5P82970 282 aaKnown RBP0.71□□□□□ -2.3
NUP98-218ENST00000530516 RPL18AQ02543 176 aaKnown RBP0.71□□□□□ -2.3
NUP98-218ENST00000530516 IRF8Q02556 426 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 IDI1Q13907 227 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 ELOCQ15369 112 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 C5orf64Q2M2E5 130 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 SLC7A5P1Q8MH63 180 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 KIF2BQ8N4N8 673 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 CYB561A3Q8NBI2 242 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 RNASE11Q8TAA1 199 aaKnown RBP0.71□□□□□ -2.3
NUP98-218ENST00000530516 TSEN15Q8WW01 171 aaKnown RBP0.71□□□□□ -2.3
NUP98-218ENST00000530516 JSRP1Q96MG2 331 aaPredicted RBP0.71□□□□□ -2.3
NUP98-218ENST00000530516 Q96MT0 163 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 SPACA5Q96QH8 159 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 TXNIPQ9H3M7 391 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 ELOVL6Q9H5J4 265 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 ZNF286AQ9HBT8 521 aa0.71□□□□□ -2.3
NUP98-218ENST00000530516 NPHP4O75161 1426 aaPredicted RBP0.71□□□□□ -2.3
NUP98-218ENST00000530516 IGHV3-21A0A0B4J1V1 117 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 IGHV3-43A0A0B4J1X8 118 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 H3BMM0 161 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 J3QT63 122 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 K7EPK0 472 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms