RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 CD80P33681 288 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 TGFBR2P37173 567 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 RBP2P50120 134 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 ATP1B3P54709 279 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 GP2P55259 537 aaKnown RBP11.76□□□□□ -0.53
USF1-209ENST00000529476 MTCP1P56278 107 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 GMFBP60983 142 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 BTG1P62324 171 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 PPP3R1P63098 170 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 FABP5Q01469 135 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 ZMYND11Q15326 602 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 SYT6Q5T7P8 510 aaPredicted RBP11.76□□□□□ -0.53
USF1-209ENST00000529476 TMEM91Q6ZNR0 172 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 LHFPL2Q6ZUX7 228 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 CEACAM19Q7Z692 300 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 C1orf87Q8N0U7 546 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 MAPK1IP1LQ8NDC0 245 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 RFT1Q96AA3 541 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 PPIAL4EA0A075B759 164 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 MAGEA13PA6NCF6 341 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 PPIAL4DF5H284 164 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 AKR7A2O43488 359 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 GPX5O75715 221 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 PPIAL4FP0DN26 164 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 FSTP19883 344 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 USF1P22415 310 aaPredicted RBP11.75□□□□□ -0.53
USF1-209ENST00000529476 PSMA1P25786 263 aaKnown RBP11.75□□□□□ -0.53
USF1-209ENST00000529476 CFHR2P36980 270 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 TRAM1Q15629 374 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 SFRP4Q6FHJ7 346 aaPredicted RBP11.75□□□□□ -0.53
USF1-209ENST00000529476 CRIP3Q6Q6R5 217 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 BATF2Q8N1L9 274 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 DEFB108BQ8NET1 73 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 OR52N4Q8NGI2 321 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 OR10Z1Q8NGY1 313 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 THRSPQ92748 146 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 SEH1LQ96EE3 360 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 ZNF488Q96MN9 340 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 NKX3-1Q99801 234 aaPredicted RBP11.75□□□□□ -0.53
USF1-209ENST00000529476 PKIBQ9C010 78 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 WDR13Q9H1Z4 485 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 PPIL3Q9H2H8 161 aaKnown RBP11.75□□□□□ -0.53
USF1-209ENST00000529476 NEK6Q9HC98 313 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 VCX3AQ9NNX9 186 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 TMEM138Q9NPI0 162 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 CKLFQ9UBR5 152 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 PPIAL4AQ9Y536 164 aa11.75□□□□□ -0.53
USF1-209ENST00000529476 FLNAP21333 2647 aaKnown RBP11.74□□□□□ -0.53
USF1-209ENST00000529476 YLPM1P49750 1951 aaKnown RBP11.74□□□□□ -0.53
USF1-209ENST00000529476 CSPG4Q6UVK1 2322 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 FN1P02751 2386 aaKnown RBP11.74□□□□□ -0.53
USF1-209ENST00000529476 IGHV3OR15-7A0A075B7D8 119 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 SRRM5B3KS81 715 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.74□□□□□ -0.53
USF1-209ENST00000529476 GABRPO00591 440 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 SMAD7O15105 426 aaKnown RBP11.74□□□□□ -0.53
USF1-209ENST00000529476 UCHL1P09936 223 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 MPZP25189 248 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 BDKRB2P30411 391 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 POU3F4P49335 361 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 KISS1Q15726 138 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 SLC25A26Q70HW3 274 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 SATL1Q86VE3 508 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 LRRC28Q86X40 367 aaPredicted RBP11.74□□□□□ -0.53
USF1-209ENST00000529476 OR5D18Q8NGL1 313 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 CLDND2Q8NHS1 167 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 SPATA3Q8NHX4 192 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 ZNF671Q8TAW3 534 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 TMEM165Q9HC07 324 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 FOXJ3Q9UPW0 622 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 JMJD1CQ15652 2540 aa11.74□□□□□ -0.53
USF1-209ENST00000529476 OOEPA6NGQ2 149 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 LGALS8O00214 317 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 MAGEB3O15480 346 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 SPRY1O43609 319 aaPredicted RBP11.73□□□□□ -0.53
USF1-209ENST00000529476 MAS1P04201 325 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 ALDOBP05062 364 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 JUNBP17275 347 aaPredicted RBP11.73□□□□□ -0.53
USF1-209ENST00000529476 IL2RGP31785 369 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 MDH2P40926 338 aaKnown RBP11.73□□□□□ -0.53
USF1-209ENST00000529476 LOXL1Q08397 574 aaPredicted RBP11.73□□□□□ -0.53
USF1-209ENST00000529476 IL24Q13007 206 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 PDZK1IP1Q13113 114 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 HSD17B12Q53GQ0 312 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 DDI2Q5TDH0 399 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 CD200R1LQ6Q8B3 271 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 BIVMQ86UB2 503 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 POC1AQ8NBT0 407 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 SLAMF9Q96A28 289 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 GAL3ST1Q99999 423 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 MTCH1Q9NZJ7 389 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 POLDIP2Q9Y2S7 368 aa11.73□□□□□ -0.53
USF1-209ENST00000529476 TRDV1A0A1B0GX56 115 aa11.72□□□□□ -0.53
USF1-209ENST00000529476 ANGPTL7O43827 346 aa11.72□□□□□ -0.53
USF1-209ENST00000529476 FSTL3O95633 263 aa11.72□□□□□ -0.53
USF1-209ENST00000529476 PGA5P0DJD9 388 aa11.72□□□□□ -0.53
USF1-209ENST00000529476 CD36P16671 472 aa11.72□□□□□ -0.53
USF1-209ENST00000529476 ADRA2CP18825 462 aa11.72□□□□□ -0.53
USF1-209ENST00000529476 GLRA1P23415 457 aa11.72□□□□□ -0.53
USF1-209ENST00000529476 ZP1P60852 638 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms