RNA–Protein interactions for RNA: ENST00000528150.1

USP33-215, Transcript of ubiquitin specific peptidase 33, human

TSL 3

Gene USP33, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP33-215	ENST00000528150	TMEM42	Q69YG0	159 aa		13.62	□□□□□ -0.23
USP33-215	ENST00000528150	BRD3OS	Q6XYD6	125 aa		13.62	□□□□□ -0.23
USP33-215	ENST00000528150	EGFL6	Q8IUX8	553 aa		13.62	□□□□□ -0.23
USP33-215	ENST00000528150	BCL6B	Q8N143	479 aa	Predicted RBP	13.62	□□□□□ -0.23
USP33-215	ENST00000528150	TBC1D15	Q8TC07	691 aa		13.62	□□□□□ -0.23
USP33-215	ENST00000528150	NPRL2	Q8WTW4	380 aa		13.62	□□□□□ -0.23
USP33-215	ENST00000528150	BORCS8	Q96FH0	119 aa		13.62	□□□□□ -0.23
USP33-215	ENST00000528150	DCTN5	Q9BTE1	182 aa		13.62	□□□□□ -0.23
USP33-215	ENST00000528150	PKIB	Q9C010	78 aa		13.62	□□□□□ -0.23
USP33-215	ENST00000528150	INPP5E	Q9NRR6	644 aa		13.62	□□□□□ -0.23
USP33-215	ENST00000528150	ACOXL	Q9NUZ1	547 aa		13.62	□□□□□ -0.23
USP33-215	ENST00000528150	FAM96B	Q9Y3D0	163 aa		13.62	□□□□□ -0.23
USP33-215	ENST00000528150	RPL36	Q9Y3U8	105 aa	Known RBP	13.62	□□□□□ -0.23
USP33-215	ENST00000528150	IGHV1-69D	A0A0B4J2H0	117 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150		A0A1B0GTI1	187 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	LOC100130705	A0A1B0GUX0	176 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	LOC107986453	A0A1B0GWG9	222 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	IRGM	A1A4Y4	181 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	BTBD17	A6NE02	478 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	RHBDL1	O75783	438 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	IGHV1-69	P01742	117 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	RNASE1	P07998	156 aa	Known RBP	13.61	□□□□□ -0.23
USP33-215	ENST00000528150	COMP	P49747	757 aa	Predicted RBP	13.61	□□□□□ -0.23
USP33-215	ENST00000528150	KLHL22	Q53GT1	634 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	NCR3LG1	Q68D85	454 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	ACP7	Q6ZNF0	438 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150		Q6ZSR3	168 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	VMO1	Q7Z5L0	202 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150		Q8IYB0	196 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	ZNF561	Q8N587	486 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	C8orf46	Q8TAG6	207 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	TRMT10A	Q8TBZ6	339 aa	Known RBP	13.61	□□□□□ -0.23
USP33-215	ENST00000528150	GAFA1	Q96PS6	74 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	SIRPD	Q9H106	197 aa		13.61	□□□□□ -0.23
USP33-215	ENST00000528150	PQLC2L	A1A4F0	135 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150		J3QLW9	94 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	NOS1AP	O75052	506 aa	Predicted RBP	13.6	□□□□□ -0.23
USP33-215	ENST00000528150	SFTPB	P07988	381 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	PGA5	P0DJD9	388 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	PSG2	P11465	335 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	MMP9	P14780	707 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	ZNF19	P17023	458 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	PRKACB	P22694	351 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	ATP1B3	P54709	279 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	ZNF85	Q03923	595 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	RAB40B	Q12829	278 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	IL24	Q13007	206 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	MED21	Q13503	144 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	TMEM86B	Q8N661	226 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	ZNF676	Q8N7Q3	588 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	LY6G5B	Q8NDX9	201 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	OR5D13	Q8NGL4	314 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	OR2G2	Q8NGZ5	317 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	SEH1L	Q96EE3	360 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	CHST5	Q9GZS9	411 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	FGF23	Q9GZV9	251 aa	Predicted RBP	13.6	□□□□□ -0.23
USP33-215	ENST00000528150	COMMD4	Q9H0A8	199 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	ESM1	Q9NQ30	184 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	SMPD3	Q9NY59	655 aa	Predicted RBP	13.6	□□□□□ -0.23
USP33-215	ENST00000528150	GLS2	Q9UI32	602 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	HHLA2	Q9UM44	414 aa		13.6	□□□□□ -0.23
USP33-215	ENST00000528150	CENPVL3	A0A0U1RRI6	287 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150		A6NIN4	97 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150		H0YAE9	185 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150		M0R1W7	72 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	CCDC159	P0C7I6	412 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	HKR1	P10072	659 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	DBT	P11182	482 aa	Known RBP	13.59	□□□□□ -0.23
USP33-215	ENST00000528150	RBP2	P50120	134 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	CCR9	P51686	369 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	ZNF91	Q05481	1191 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	DMRTC1	Q5HYR2	192 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	METAP1D	Q6UB28	335 aa	Predicted RBP	13.59	□□□□□ -0.23
USP33-215	ENST00000528150	C1orf122	Q6ZSJ8	110 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	MKX	Q8IYA7	352 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	FAM185A	Q8N0U4	392 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	SETD9	Q8NE22	299 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	SSMEM1	Q8WWF3	244 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	CPNE2	Q96FN4	548 aa	Predicted RBP	13.59	□□□□□ -0.23
USP33-215	ENST00000528150	SDSL	Q96GA7	329 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	DUX5	Q96PT3	197 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	TBX15	Q96SF7	602 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	MBOAT4	Q96T53	435 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	ALG8	Q9BVK2	526 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	DPAGT1	Q9H3H5	408 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	METTL8	Q9H825	291 aa	Known RBP	13.59	□□□□□ -0.23
USP33-215	ENST00000528150	OR14J1	Q9UGF5	321 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	EXOG	Q9Y2C4	368 aa	Known RBP	13.59	□□□□□ -0.23
USP33-215	ENST00000528150	PCDHGB5	Q9Y5G0	923 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	POMT1	Q9Y6A1	747 aa		13.59	□□□□□ -0.23
USP33-215	ENST00000528150	RFPL4A	A6NLU0	287 aa		13.58	□□□□□ -0.24
USP33-215	ENST00000528150	RFPL4AL1	F8VTS6	287 aa		13.58	□□□□□ -0.24
USP33-215	ENST00000528150		H3BSH0	61 aa		13.58	□□□□□ -0.24
USP33-215	ENST00000528150	SYNGR1	O43759	233 aa		13.58	□□□□□ -0.24
USP33-215	ENST00000528150	PAH	P00439	452 aa		13.58	□□□□□ -0.24
USP33-215	ENST00000528150	KNG1	P01042	644 aa		13.58	□□□□□ -0.24
USP33-215	ENST00000528150	ISG15	P05161	165 aa		13.58	□□□□□ -0.24
USP33-215	ENST00000528150	MPZ	P25189	248 aa		13.58	□□□□□ -0.24
USP33-215	ENST00000528150	PRDX2	P32119	198 aa		13.58	□□□□□ -0.24
USP33-215	ENST00000528150	GBX2	P52951	348 aa	Predicted RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms