RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 TSEN15Q8WW01 171 aaKnown RBP5.13□□□□□ -1.59
CD44-225ENST00000527326 SUSD6Q92537 303 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 NEIL2Q969S2 332 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 PTX4Q96A99 478 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 MRGPRFQ96AM1 343 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 SLAMF6Q96DU3 332 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 NEURL3Q96EH8 262 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 OR10C1Q96KK4 312 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 PRAP1Q96NZ9 151 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 LRRC3BQ96PB8 259 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 SCGB3A2Q96PL1 93 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 OR5B12Q96R08 314 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 MACROD1Q9BQ69 325 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 ABHD14AQ9BUJ0 271 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 OR52D1Q9H346 318 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 MOB1AQ9H8S9 216 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 WFDC1Q9HC57 220 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 GP6Q9HCN6 339 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 MBNL1Q9NR56 388 aaKnown RBP5.13□□□□□ -1.59
CD44-225ENST00000527326 PXMP2Q9NR77 195 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 TM7SF3Q9NS93 570 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 SIDT1Q9NXL6 827 aaKnown RBP5.13□□□□□ -1.59
CD44-225ENST00000527326 ZNF586Q9NXT0 402 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 MSRAQ9UJ68 235 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 SLC7A7Q9UM01 511 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 PIN4Q9Y237 131 aaKnown RBP5.13□□□□□ -1.59
CD44-225ENST00000527326 PAM16Q9Y3D7 125 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 WDR45Q9Y484 360 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 RNF115Q9Y4L5 304 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 PLXNA3P51805 1871 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 SCN8AQ9UQD0 1980 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 FRMPD3Q5JV73 1810 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 A0A087WUU8 490 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 A0A1W2PPK0 400 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 NKX2-6A6NCS4 301 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 SLC38A8A6NNN8 435 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 PIN1P1O15428 100 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 HCRTR1O43613 425 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 TRAF3IP2O43734 574 aaPredicted RBP5.12□□□□□ -1.59
CD44-225ENST00000527326 PRAMEF11O60813 436 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 RHBDL1O75783 438 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 STK17BO94768 372 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 SFT2D2O95562 160 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 IGSF6O95976 241 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 CH25HO95992 272 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 SMIM17P0DL12 118 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 ESDP10768 282 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 PSG1P11464 419 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 CTSEP14091 401 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 EPORP19235 508 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 TCN2P20062 427 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 KLK2P20151 261 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 NTSP30990 170 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 MC4RP32245 332 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 GABRA3P34903 492 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 PPP1CCP36873 323 aaKnown RBP5.12□□□□□ -1.59
CD44-225ENST00000527326 CTRLP40313 264 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 ADCYAP1R1P41586 468 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 METAP1P53582 386 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 CRYBA4P53673 196 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 RND3P61587 244 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 RPS15P62841 145 aaKnown RBP5.12□□□□□ -1.59
CD44-225ENST00000527326 SRPXP78539 464 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 ID2Q02363 134 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 ZNF92Q03936 586 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 BAXQ07812 192 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 IL15RAQ13261 267 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 RAB31Q13636 194 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 RAB32Q13637 225 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 ICAM4Q14773 271 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 UPP1Q16831 310 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 AMZ1Q400G9 498 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 TCEAL5Q5H9L2 206 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 PRAMEF5Q5TYX0 476 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 PRAMEF6Q5VXH4 476 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 EEF1DP3Q658K8 133 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 CDC42EP5Q6NZY7 148 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 RPTNQ6XPR3 784 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 STAC2Q6ZMT1 411 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 MBOAT2Q6ZWT7 520 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 TMPRSS12Q86WS5 348 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 UMODL1-AS1Q8N2C9 162 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 CCDC71LQ8N9Z2 235 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 APCDD1LQ8NCL9 501 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 OR4D11Q8NGI4 311 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 OR4P4Q8NGL7 312 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 CMTM2Q8TAZ6 248 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 ADAMTS15Q8TE58 950 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 SLC38A5Q8WUX1 472 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 DVL3Q92997 716 aaPredicted RBP5.12□□□□□ -1.59
CD44-225ENST00000527326 PELI1Q96FA3 418 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 GUCD1Q96NT3 240 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 RAB11FIP5Q9BXF6 653 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 SLC25A18Q9H1K4 315 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 LINC00597Q9H2U6 94 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 ZDHHC6Q9H6R6 413 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 TMEM38BQ9NVV0 291 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 C19orf73Q9NVV2 129 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 FLRT3Q9NZU0 649 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms