RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 OR1S1Q8NH92 325 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 NEIL3Q8TAT5 605 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 FAM172AQ8WUF8 416 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 BLNKQ8WV28 456 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 ANKRD9Q96BM1 317 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 DCPSQ96C86 337 aaKnown RBP2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 SMIM12Q96EX1 92 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 IMP4Q96G21 291 aaKnown RBP2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 RNF185Q96GF1 192 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 SMARCD1Q96GM5 515 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 CEP19Q96LK0 163 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 OR2M4Q96R27 311 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 ARHGDIGQ99819 225 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 NIPSNAP1Q9BPW8 284 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 FAAP24Q9BTP7 215 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 Q9H3A6 140 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 SLC25A22Q9H936 323 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 RRAGDQ9NQL2 400 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 CCL28Q9NRJ3 127 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 DDX19AQ9NUU7 478 aaKnown RBP2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 TMEM9Q9P0T7 183 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 FARSAQ9Y285 508 aaKnown RBP2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 ORC6Q9Y5N6 252 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 PCDH11XQ9BZA7 1347 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 ROCK1Q13464 1354 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 EIF3AQ14152 1382 aaKnown RBP2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 SCN5AQ14524 2016 aa2.3□□□□□ -2.04
TRAPPC4-207ENST00000526141 FRMPD3Q5JV73 1810 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 FLT4P35916 1363 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 PLEKHG1Q9ULL1 1385 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 METTL15A6NJ78 407 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 MYL12BO14950 172 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 KMOO15229 486 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 ZNF253O75346 499 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 REM1O75628 298 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 RP2O75695 350 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 CNMDO75829 334 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 IFNA14P01570 189 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 IGLV1-44P01699 117 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 ICAM2P13598 275 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 CD99P14209 185 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 CBR1P16152 277 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 ALOX5APP20292 161 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 COX7A1P24310 79 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 HTR1EP28566 365 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 SSTR5P35346 364 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 SULT1A1P50225 295 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 SULT1A2P50226 295 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 ERFP50548 548 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 P2RX1P51575 399 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 NDUFA8P51970 172 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 NCBP2P52298 156 aaKnown RBP eCLIP2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 ZNF138P52744 262 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 CDKN2DP55273 166 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 C1QTNF8P60827 252 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 S100A12P80511 92 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 PRDX1Q06830 199 aaKnown RBP2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 INCA1Q0VD86 236 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 LAMTOR4Q0VGL1 99 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 GINS1Q14691 196 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 SHHQ15465 462 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 TAF1AQ15573 450 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 SLC9A3R2Q15599 337 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 ZNF718Q3SXZ3 478 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 ZFP69Q49AA0 526 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 LINC00173Q6ZV60 143 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 MOB1BQ7L9L4 216 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 SMIM15Q7Z3B0 74 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 TMED4Q7Z7H5 227 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 LGI3Q8N145 548 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 CCNYL1Q8N7R7 359 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 GPR32P1Q8NGA4 272 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 OR11H7Q8NGC8 314 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 OR13G1Q8NGZ3 307 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 NEK7Q8TDX7 302 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 AURKBQ96GD4 344 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 SNF8Q96H20 258 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 SIGLEC12Q96PQ1 595 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 SMIM14Q96QK8 99 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 TAPBPLQ9BX59 468 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 SUCNR1Q9BXA5 334 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 FGFBP2Q9BYJ0 223 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 TSGA10Q9BZW7 698 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 CLMPQ9H6B4 373 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 VSIRQ9H7M9 311 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 ZNF556Q9HAH1 456 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 GID8Q9NWU2 228 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 DHRS4-AS1Q9P1J3 65 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 VPS29Q9UBQ0 182 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 CACNG5Q9UF02 275 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 FBXO5Q9UKT4 447 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 RAB26Q9ULW5 256 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 NDRG2Q9UN36 371 aaKnown RBP2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 TIMM22Q9Y584 194 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 ALG5Q9Y673 324 aa2.29□□□□□ -2.04
TRAPPC4-207ENST00000526141 RIMBP3CA6NJZ7 1639 aa2.28□□□□□ -2.04
TRAPPC4-207ENST00000526141 RIMBP3BA6NNM3 1639 aa2.28□□□□□ -2.04
TRAPPC4-207ENST00000526141 RIMBP3Q9UFD9 1639 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 182.4 ms