RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 RTL8CO15255 209 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 TNFAIP8O95379 198 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 PSMB5P28074 263 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 UBE2G2P60604 165 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 TPM4P67936 248 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 C2orf83Q53S99 150 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 FAM78AQ5JUQ0 283 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 Q5W150 140 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 THOC7Q6I9Y2 204 aaKnown RBP2.88□□□□□ -1.95
CSDE1-211ENST00000525970 CALHM1Q8IU99 346 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 RIMKLAQ8IXN7 391 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 BOD1L2Q8IYS8 172 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 PGAM4Q8N0Y7 254 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 ZNF645Q8N7E2 425 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 OR4K17Q8NGC6 315 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 HGDQ93099 445 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 NARS2Q96I59 477 aaKnown RBP2.88□□□□□ -1.95
CSDE1-211ENST00000525970 CYYR1Q96J86 154 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 ARL5BQ96KC2 179 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 ALS2CR12Q96Q35 445 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 SPACA5Q96QH8 159 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 ZNF649Q9BS31 505 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 NXF2Q9GZY0 626 aaKnown RBP2.88□□□□□ -1.95
CSDE1-211ENST00000525970 HDHD2Q9H0R4 259 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 WDR54Q9H977 334 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 PARVGQ9HBI0 331 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 ZNRD1Q9P1U0 126 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 ZNF222Q9UK12 451 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 TBX21Q9UL17 535 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 SLC22A14Q9Y267 594 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 ORC6Q9Y5N6 252 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 NUP153P49790 1475 aaKnown RBP2.88□□□□□ -1.95
CSDE1-211ENST00000525970 ABCB11O95342 1321 aa2.88□□□□□ -1.95
CSDE1-211ENST00000525970 PTPRTO14522 1441 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 IGKV6-21A0A0C4DH24 114 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 IGHV7-4-1A0A0J9YVY3 117 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 TMEM223A0PJW6 202 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 OR5H1A6NKK0 313 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 F8VZ95 297 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 TPM3P06753 285 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 RD3LP0DJH9 198 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 ZNF35P13682 527 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 IL3RAP26951 378 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 MNAT1P51948 309 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 TAS2R31P59538 309 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 PRKCDQ05655 676 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 FLOT2Q14254 428 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 SHHQ15465 462 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 TRAM1Q15629 374 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 SNRNP35Q16560 246 aaKnown RBP2.87□□□□□ -1.95
CSDE1-211ENST00000525970 UBE2SQ16763 222 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 TMEM249Q2WGJ8 235 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 DEFB116Q30KQ4 102 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 CEACAM21Q3KPI0 293 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 SLC25A35Q3KQZ1 300 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 LINC00303Q3SY05 128 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 TIMM23BQ5SRD1 257 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 IDNKQ5T6J7 187 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 HBMQ6B0K9 141 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 SSX7Q7RTT5 188 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 MDP1Q86V88 176 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 ACBD4Q8NC06 268 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 OR8G5Q8NG78 346 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 OR2M7Q8NG81 312 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 OR4K2Q8NGD2 314 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 CIRBP-AS1Q8TBR5 109 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 SFXN5Q8TD22 340 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 SNF8Q96H20 258 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 UPF3BQ9BZI7 483 aaKnown RBP2.87□□□□□ -1.95
CSDE1-211ENST00000525970 ASB8Q9H765 288 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 IMP3Q9NV31 184 aaKnown RBP2.87□□□□□ -1.95
CSDE1-211ENST00000525970 NYAP2Q9P242 653 aa2.87□□□□□ -1.95
CSDE1-211ENST00000525970 NACAE9PAV3 2078 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 NPHP4O75161 1426 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-211ENST00000525970 A0A1W2PP18 115 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 FABP12A6NFH5 140 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 TMX2-CTNND1H3BSU7 103 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 SULT1C2O00338 296 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 CRXO43186 299 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-211ENST00000525970 CHST10O43529 356 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 HLA-DQA1P01909 254 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 PRSS3P35030 304 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 TUFMP49411 452 aaKnown RBP2.86□□□□□ -1.95
CSDE1-211ENST00000525970 ZNF133P52736 654 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-211ENST00000525970 EMP2P54851 167 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 PLTPP55058 493 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 BAXQ07812 192 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 PIGHQ14442 188 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-211ENST00000525970 ZNF658BQ4V348 819 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-211ENST00000525970 OR10J3Q5JRS4 329 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 SAXO2Q658L1 398 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 CLEC19AQ6UXS0 136 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 CRLF3Q8IUI8 442 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 BBS7Q8IWZ6 715 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 RNASEH2CQ8TDP1 164 aaKnown RBP2.86□□□□□ -1.95
CSDE1-211ENST00000525970 IFT81Q8WYA0 676 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 TNFRSF14Q92956 283 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 TMEM159Q96B96 161 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 ZMYND19Q96E35 227 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-211ENST00000525970 NEURL3Q96EH8 262 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms