RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 NPR2P20594 1047 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 ADORA2BP29275 332 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 HMGCLP35914 325 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 YAP1P46937 504 aaKnown RBP2.29□□□□□ -2.04
CSDE1-209ENST00000525132 RPL29P47914 159 aaKnown RBP2.29□□□□□ -2.04
CSDE1-209ENST00000525132 NPBWR2P48146 333 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 TFPI2P48307 235 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 CRISP1P54107 249 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 BIDP55957 195 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 RPS15AP62244 130 aaKnown RBP2.29□□□□□ -2.04
CSDE1-209ENST00000525132 GNB1P62873 340 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 CHRNB3Q05901 458 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 STX3Q13277 289 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 VAMP3Q15836 100 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 MICAQ29983 383 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 C18orf21Q32NC0 220 aaPredicted RBP2.29□□□□□ -2.04
CSDE1-209ENST00000525132 SAMD4BQ5PRF9 694 aaKnown RBP2.29□□□□□ -2.04
CSDE1-209ENST00000525132 BSPRYQ5W0U4 402 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 EMBQ6PCB8 327 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 REG3GQ6UW15 175 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 SPESP1Q6UW49 350 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 GSG1LQ6UXU4 331 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 COX15Q7KZN9 410 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 PRSS41Q7RTY9 318 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 FAM122BQ7Z309 247 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 CMC1Q7Z7K0 106 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 APRG1Q8IVJ8 170 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 LRRC8AQ8IWT6 810 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 NRMQ8IXM6 262 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 MUC15Q8N387 334 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 AQP11Q8NBQ7 271 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 OR2G2Q8NGZ5 317 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 ANGPTL6Q8NI99 470 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 FLVCR1-AS1Q8TAF5 88 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 SLC7A13Q8TCU3 470 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 FRAT1Q92837 279 aaPredicted RBP2.29□□□□□ -2.04
CSDE1-209ENST00000525132 NEIL2Q969S2 332 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 ISOC2Q96AB3 205 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 APH1AQ96BI3 265 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 CCDC124Q96CT7 223 aaKnown RBP2.29□□□□□ -2.04
CSDE1-209ENST00000525132 ARL5BQ96KC2 179 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 IMMP1LQ96LU5 166 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 TSSK3Q96PN8 268 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 OR8B4Q96RC9 309 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 CYTH2Q99418 400 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 SORT1Q99523 831 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 SH3GL1Q99961 368 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 NDEL1Q9GZM8 345 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 NMUR2Q9GZQ4 415 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 ELOVL4Q9GZR5 314 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 OPN3Q9H1Y3 402 aaPredicted RBP2.29□□□□□ -2.04
CSDE1-209ENST00000525132 OR52A5Q9H2C5 316 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 FOLH1BQ9HBA9 442 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 CSNK1G1Q9HCP0 422 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 MRPL47Q9HD33 250 aaKnown RBP2.29□□□□□ -2.04
CSDE1-209ENST00000525132 AMBNQ9NP70 447 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 MYOZ1Q9NP98 299 aaPredicted RBP2.29□□□□□ -2.04
CSDE1-209ENST00000525132 TIGARQ9NQ88 270 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 ZNF275Q9NSD4 429 aaPredicted RBP2.29□□□□□ -2.04
CSDE1-209ENST00000525132 HRASLS2Q9NWW9 162 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 ADA2Q9NZK5 511 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 PLLPQ9Y342 182 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 SAR1BQ9Y6B6 198 aa2.29□□□□□ -2.04
CSDE1-209ENST00000525132 IGLV4-3A0A075B6K6 122 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 A0A087WWV3 80 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 TRPC5OSA6NMA1 111 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 FOXI3A8MTJ6 420 aaPredicted RBP2.28□□□□□ -2.04
CSDE1-209ENST00000525132 SHISA9B4DS77 424 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 RFXANKO14593 260 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 GMDSO60547 372 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 ENTPD5O75356 428 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 NDUFS6O75380 124 aaKnown RBP2.28□□□□□ -2.04
CSDE1-209ENST00000525132 TNFSF13O75888 250 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 MPZL1O95297 269 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 SLC2A10O95528 541 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 ETHE1O95571 254 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 SERPINA5P05154 406 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 CT45A10P0DMU9 189 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 CTRB1P17538 263 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 HTR1FP30939 366 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 SLC26A3P40879 764 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 CYB561P49447 251 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 GSK3BP49841 420 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 LRRC63Q05C16 580 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 ARL6IP1Q15041 203 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 TSC22D1Q15714 1073 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 DEFB112Q30KQ8 113 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 CTRB2Q6GPI1 263 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 ANKRD26P1Q6NSI1 321 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 TRIM40Q6P9F5 258 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 RNF165Q6ZSG1 346 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 ZNF621Q6ZSS3 439 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 PID1Q7Z2X4 250 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 C9orf40Q8IXQ3 194 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 PDZD9Q8IXQ8 264 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 ZBED8Q8IZ13 594 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 FTMTQ8N4E7 242 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 TRAM1L1Q8N609 369 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 TMEM251Q8N6I4 163 aa2.28□□□□□ -2.04
CSDE1-209ENST00000525132 LINC00469Q8N7U9 141 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms