RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 FAM220AQ7Z4H9 259 aa15.26■□□□□ 0.03
CAPN1-203ENST00000525013 CATSPERDQ86XM0 798 aa15.26■□□□□ 0.03
CAPN1-203ENST00000525013 POC1AQ8NBT0 407 aa15.26■□□□□ 0.03
CAPN1-203ENST00000525013 SGMS2Q8NHU3 365 aa15.26■□□□□ 0.03
CAPN1-203ENST00000525013 C8orf46Q8TAG6 207 aa15.26■□□□□ 0.03
CAPN1-203ENST00000525013 SSMEM1Q8WWF3 244 aa15.26■□□□□ 0.03
CAPN1-203ENST00000525013 RORBQ92753 470 aa15.26■□□□□ 0.03
CAPN1-203ENST00000525013 CHIAQ9BZP6 476 aa15.26■□□□□ 0.03
CAPN1-203ENST00000525013 ELL3Q9HB65 397 aaPredicted RBP15.26■□□□□ 0.03
CAPN1-203ENST00000525013 GNG8Q9UK08 70 aa15.26■□□□□ 0.03
CAPN1-203ENST00000525013 ZNF222Q9UK12 451 aa15.26■□□□□ 0.03
CAPN1-203ENST00000525013 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.26■□□□□ 0.03
CAPN1-203ENST00000525013 MAB21L2Q9Y586 359 aa15.26■□□□□ 0.03
CAPN1-203ENST00000525013 PQLC2LA1A4F0 135 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 ANKRD61A6NGH8 418 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 RFPL4AA6NLU0 287 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 DHRS7CA6NNS2 312 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 RFPL4AL1F8VTS6 287 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 H3BNX3 289 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 NXPH2O95156 264 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 EEF1B2P24534 225 aaKnown RBP15.25■□□□□ 0.03
CAPN1-203ENST00000525013 DLX1P56177 255 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 SHISA2Q6UWI4 295 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 BATF2Q8N1L9 274 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 PIP4P2Q8N4L2 257 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 TRMT10AQ8TBZ6 339 aaKnown RBP15.25■□□□□ 0.03
CAPN1-203ENST00000525013 TBC1D15Q8TC07 691 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 TRUB1Q8WWH5 349 aaKnown RBP15.25■□□□□ 0.03
CAPN1-203ENST00000525013 SLC7A11Q9UPY5 501 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 POLDIP2Q9Y2S7 368 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 PKD1L1Q8TDX9 2849 aa15.25■□□□□ 0.03
CAPN1-203ENST00000525013 FAM230AA0A1W2PPH8 454 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 A0A1W2PRD5 423 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 A0A1W2PRF3 423 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 A0A1W2PRM7 423 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 ENTPD6O75354 484 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 PGA5P0DJD9 388 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 MDKP21741 143 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-203ENST00000525013 CCL1P22362 96 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 ALDH3A2P51648 485 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 GUCA2AQ02747 115 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 KLRD1Q13241 179 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 BLMHQ13867 455 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 TP53I3Q53FA7 332 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 ANGPTL5Q86XS5 388 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 C10orf67Q8IYJ2 551 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 FAM185AQ8N0U4 392 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 TMEM86BQ8N661 226 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 Q8N7P7 452 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 NPRL2Q8WTW4 380 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 SDSLQ96GA7 329 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 HRASLS5Q96KN8 279 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 USE1Q9NZ43 259 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 POMT1Q9Y6A1 747 aa15.24■□□□□ 0.03
CAPN1-203ENST00000525013 POM121CA8CG34 1229 aa15.23■□□□□ 0.03
CAPN1-203ENST00000525013 RNASEK-C17orf49H0YIS7 233 aa15.23■□□□□ 0.03
CAPN1-203ENST00000525013 SLC1A7O00341 560 aa15.23■□□□□ 0.03
CAPN1-203ENST00000525013 IGHV4-59P01825 116 aa15.23■□□□□ 0.03
CAPN1-203ENST00000525013 PRDX2P32119 198 aa15.23■□□□□ 0.03
CAPN1-203ENST00000525013 METAP1DQ6UB28 335 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-203ENST00000525013 C1orf122Q6ZSJ8 110 aa15.23■□□□□ 0.03
CAPN1-203ENST00000525013 Q6ZSR3 168 aa15.23■□□□□ 0.03
CAPN1-203ENST00000525013 PRSS35Q8N3Z0 413 aa15.23■□□□□ 0.03
CAPN1-203ENST00000525013 CBR4Q8N4T8 237 aa15.23■□□□□ 0.03
CAPN1-203ENST00000525013 CD177Q8N6Q3 437 aa15.23■□□□□ 0.03
CAPN1-203ENST00000525013 RNFT2Q96EX2 444 aa15.23■□□□□ 0.03
CAPN1-203ENST00000525013 METTL8Q9H825 291 aaKnown RBP15.23■□□□□ 0.03
CAPN1-203ENST00000525013 OR14J1Q9UGF5 321 aa15.23■□□□□ 0.03
CAPN1-203ENST00000525013 CAB39Q9Y376 341 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-203ENST00000525013 TRBV23-1A0A0A0MS06 115 aa15.22■□□□□ 0.03
CAPN1-203ENST00000525013 DAPL1A0PJW8 107 aa15.22■□□□□ 0.03
CAPN1-203ENST00000525013 H0YAE9 185 aa15.22■□□□□ 0.03
CAPN1-203ENST00000525013 M0R1W7 72 aa15.22■□□□□ 0.03
CAPN1-203ENST00000525013 NPFFO15130 113 aa15.22■□□□□ 0.03
CAPN1-203ENST00000525013 NOS1APO75052 506 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-203ENST00000525013 CEBPDP49716 269 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-203ENST00000525013 SNRPGP62308 76 aaKnown RBP15.22■□□□□ 0.03
CAPN1-203ENST00000525013 ZNF85Q03923 595 aa15.22■□□□□ 0.03
CAPN1-203ENST00000525013 NCR3LG1Q68D85 454 aa15.22■□□□□ 0.03
CAPN1-203ENST00000525013 CALHM1Q8IU99 346 aa15.22■□□□□ 0.03
CAPN1-203ENST00000525013 RDH10Q8IZV5 341 aa15.22■□□□□ 0.03
CAPN1-203ENST00000525013 NRIP2Q9BQI9 281 aa15.22■□□□□ 0.03
CAPN1-203ENST00000525013 LOC107986453A0A1B0GWG9 222 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 MEIOCA2RUB1 952 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 GATBO75879 557 aaKnown RBP15.21■□□□□ 0.03
CAPN1-203ENST00000525013 SERPINA3P01011 423 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 FBP1P09467 338 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 UBCP0CG48 685 aaKnown RBP15.21■□□□□ 0.03
CAPN1-203ENST00000525013 MPZP25189 248 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 IER3P46695 156 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 RAG2P55895 527 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 ACTC1P68032 377 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 ACTA1P68133 377 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 UBE2V2Q15819 145 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 MEDAGQ5VYS4 303 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 PNKDQ8N490 385 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 ZNF561Q8N587 486 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 CCDC54Q8NEL0 328 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 OR4F5Q8NH21 305 aa15.21■□□□□ 0.03
CAPN1-203ENST00000525013 TNFRSF14Q92956 283 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms