RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 OXGR1Q96P68 337 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 TSSK3Q96PN8 268 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 ALKBH3Q96Q83 286 aaPredicted RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 OR5B2Q96R09 309 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 NAP1L3Q99457 506 aaPredicted RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 GPR22Q99680 433 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 ARHGDIGQ99819 225 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 TAPBPLQ9BX59 468 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 EBPLQ9BY08 206 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 OR51B5Q9H339 312 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 ELOVL6Q9H5J4 265 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 RABEP2Q9H5N1 569 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 OPA3Q9H6K4 179 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 NOL11Q9H8H0 719 aaKnown RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 MARCH7Q9H992 704 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 SIAEQ9HAT2 523 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 RNPEPL1Q9HAU8 725 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 CRLF2Q9HC73 371 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 ABCB9Q9NP78 766 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 C20orf96Q9NUD7 363 aaPredicted RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 VNN3Q9NY84 501 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 TAAR3PQ9P1P4 343 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 ERVK-18Q9QC07 812 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 GALPQ9UBC7 116 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 VPS29Q9UBQ0 182 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 EIF3KQ9UBQ5 218 aaKnown RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 Q9UF83 564 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 GMEB1Q9Y692 573 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 MINOS1-NBL1R4GNA1 71 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 HEATR1Q9H583 2144 aaKnown RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 TANC2Q9HCD6 1990 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 SCN3AQ9NY46 2000 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 IQCMA0A1B0GVH7 501 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 ISPDA4D126 451 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 A6NDX4 124 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 ZSCAN5BA6NJL1 495 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 ODF3BA8MYP8 253 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 IQCF6A8MYZ5 107 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 C11orf94C9JXX5 98 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 LGALS8O00214 317 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 AP3D1O14617 1153 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 EIF3HO15372 352 aaKnown RBP eCLIP1.1□□□□□ -2.23
CD44-212ENST00000524922 TXNL1O43396 289 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 SYNGR1O43759 233 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 DOK2O60496 412 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 GMDSO60547 372 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 FMO6PO60774 539 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 STX11O75558 287 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR2F2O95006 317 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 LGI1O95970 557 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 IGKV1D-16P01601 117 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 IGHG1P01857 330 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OPN1LWP04000 364 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 KLK1P06870 262 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 CSN3P07498 182 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 RBP1P09455 135 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 TSPAN19P0C672 248 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 OR8U9P0C7N5 309 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 IGHV1-8P0DP01 117 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 PNMTP11086 282 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 IRF2P14316 349 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 STMN1P16949 149 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 PTNP21246 168 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 AADACP22760 399 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 DUTP33316 252 aaKnown RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 GABRA3P34903 492 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 SAA4P35542 130 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 RPL4P36578 427 aaKnown RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 MAGEA12P43365 314 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 VDAC2P45880 294 aaPredicted RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 CCR4P51679 360 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 NCBP2P52298 156 aaKnown RBP eCLIP1.1□□□□□ -2.23
CD44-212ENST00000524922 CLNS1AP54105 237 aaKnown RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 PKNOX1P55347 436 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 ERVK-16P61578 105 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 ESRRGP62508 458 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 ERVK-25P63136 954 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 TPM4P67936 248 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 SLC35B1P78383 322 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 TNFAIP6P98066 277 aaPredicted RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 STX5Q13190 355 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 KIAA0141Q14154 515 aaPredicted RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 EXOSC7Q15024 291 aaKnown RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 NPTX1Q15818 432 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 NNATQ16517 81 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 CEACAM16Q2WEN9 425 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 ARHGAP11BQ3KRB8 267 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 RFTN2Q52LD8 501 aaPredicted RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 HSP90AA5PQ58FG0 334 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 HSP90AA4PQ58FG1 418 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 SOHLH1Q5JUK2 328 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 DCST2Q5T1A1 773 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.1□□□□□ -2.23
CD44-212ENST00000524922 SEL1L2Q5TEA6 688 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 FAM27BQ5VT28 67 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 C1orf140Q5VVS0 124 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 ZNF770Q6IQ21 691 aaPredicted RBP1.1□□□□□ -2.23
CD44-212ENST00000524922 KRT80Q6KB66 452 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 TMEM53Q6P2H8 277 aa1.1□□□□□ -2.23
CD44-212ENST00000524922 CEMP1Q6PRD7 247 aaPredicted RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms