RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 TAS2R39P59534 338 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 CDC20Q12834 499 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 RCAN2Q14206 197 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 ZNF846Q147U1 533 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 FAM83EQ2M2I3 478 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 RGS21Q2M5E4 152 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 COA6Q5JTJ3 125 aaKnown RBP3.92□□□□□ -1.78
SKP1-213ENST00000524288 XAF1Q6GPH4 301 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 ALKAL1Q6UXT8 129 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 RIMKLAQ8IXN7 391 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 DEFB106AQ8N104 65 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 ZNF786Q8N393 782 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 NPWQ8N729 165 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 C12orf29Q8N999 325 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 OR52E4Q8NGH9 312 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 NUBPLQ8TB37 319 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 CANT1Q8WVQ1 401 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 S100ZQ8WXG8 99 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 POP5Q969H6 163 aaKnown RBP3.92□□□□□ -1.78
SKP1-213ENST00000524288 EEF1AKMT3Q96AZ1 226 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 ISG20Q96AZ6 181 aaKnown RBP3.92□□□□□ -1.78
SKP1-213ENST00000524288 RNF185Q96GF1 192 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 SLC35E1Q96K37 410 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 CCDC115Q96NT0 180 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 TBL1YQ9BQ87 522 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 ELOVL6Q9H5J4 265 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 TUBG2Q9NRH3 451 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 FAM49BQ9NUQ9 324 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 CMTM6Q9NX76 183 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 ZNF226Q9NYT6 803 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 ENPP5Q9UJA9 477 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 SLC17A4Q9Y2C5 497 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 MN1Q10571 1320 aaPredicted RBP3.92□□□□□ -1.78
SKP1-213ENST00000524288 A8MU10 97 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 UPK1AO00322 258 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 PIRO00625 290 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 XKRYO14609 159 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 SLC22A1O15245 554 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 MRPS14O60783 128 aaKnown RBP3.91□□□□□ -1.78
SKP1-213ENST00000524288 CCNB2O95067 398 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 GABARAPO95166 117 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 C6orf47O95873 294 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 IGLV3-25P01717 112 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 KCNE1P15382 129 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 IL1RNP18510 177 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 PRRC2AP48634 2157 aaKnown RBP3.91□□□□□ -1.78
SKP1-213ENST00000524288 NMUP48645 174 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 RND2P52198 227 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 DAOAP59103 153 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 TPI1P60174 286 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 UBE2MP61081 183 aaKnown RBP3.91□□□□□ -1.78
SKP1-213ENST00000524288 SLC7A9P82251 487 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 PAX5Q02548 391 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 NOTCH2Q04721 2471 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 MXD1Q05195 221 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 PRPSAP1Q14558 356 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 PON3Q15166 354 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 SF3A2Q15428 464 aaKnown RBP3.91□□□□□ -1.78
SKP1-213ENST00000524288 RSPO1Q2MKA7 263 aaPredicted RBP3.91□□□□□ -1.78
SKP1-213ENST00000524288 C2orf83Q53S99 150 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 ZNF678Q5SXM1 525 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 GPR107Q5VW38 600 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 MFSD14CQ5VZR4 134 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 OR52W1Q6IF63 320 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 PID1Q7Z2X4 250 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 DNAAF3Q8N9W5 541 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 MARCH1Q8TCQ1 289 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 PHF10Q8WUB8 498 aaKnown RBP3.91□□□□□ -1.78
SKP1-213ENST00000524288 C8orf44Q96CB5 159 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 C19orf60Q96EN9 201 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 NRBF2Q96F24 287 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 CTRCQ99895 268 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 UCK2Q9BZX2 261 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 ACTR3CQ9C0K3 210 aaPredicted RBP3.91□□□□□ -1.78
SKP1-213ENST00000524288 NAA50Q9GZZ1 169 aaKnown RBP3.91□□□□□ -1.78
SKP1-213ENST00000524288 MFSD1Q9H3U5 465 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 LYRM4Q9HD34 91 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 HMG20AQ9NP66 347 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 CHRAC1Q9NRG0 131 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 FBXO5Q9UKT4 447 aa3.91□□□□□ -1.78
SKP1-213ENST00000524288 ANAPC1Q9H1A4 1944 aa3.9□□□□□ -1.78
SKP1-213ENST00000524288 PLXNB3Q9ULL4 1909 aa3.9□□□□□ -1.78
SKP1-213ENST00000524288 A0A0J9YYE9 177 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 A0A1W2PP18 115 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 CLDN25C9JDP6 229 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 TMX2-CTNND1H3BSU7 103 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 M0QX08 132 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 KCNK1O00180 336 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 UBFD1O14562 309 aaKnown RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 CASC3O15234 703 aaKnown RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 NUPL2O15504 423 aaKnown RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 UGT2B11O75310 529 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 FABP3P05413 133 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 RPS17P08708 135 aaKnown RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 HTR1AP08908 422 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 DNAH10OSP0CZ25 163 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 NELFEP18615 380 aaKnown RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 CD9P21926 228 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 S100A1P23297 94 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 CRHBPP24387 322 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms