RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 SRPK3Q9UPE1 567 aa7.99□□□□□ -1.13
CSMD1-212ENST00000523387 ELOA3CA0A087WX78 387 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-212ENST00000523387 TCRBV21S2A2A0A5A6 115 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 TNFRSF10CO14798 259 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 RER1O15258 196 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 ANGPTL7O43827 346 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 DFFBO76075 338 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 OR7C1O76099 320 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-212ENST00000523387 SEMA4FO95754 770 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 DANCRP0C864 163 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 MDKP21741 143 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-212ENST00000523387 ZNF133P52736 654 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-212ENST00000523387 H3F3AP84243 136 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 TMEM230Q96A57 120 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 TMEM106CQ9BVX2 250 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 TBX21Q9UL17 535 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 WASF3Q9UPY6 502 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 ARGFXA6NJG6 315 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 FTCDNL1E5RQL4 147 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 PTBP3O95758 552 aaKnown RBP7.98□□□□□ -1.13
CSMD1-212ENST00000523387 CTSDP07339 412 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-212ENST00000523387 GPX4P36969 197 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-212ENST00000523387 RPS23P62266 143 aaKnown RBP7.98□□□□□ -1.13
CSMD1-212ENST00000523387 BEND4Q6ZU67 534 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 RNF133Q8WVZ7 376 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 FRZBQ92765 325 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 GNPNAT1Q96EK6 184 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-212ENST00000523387 LIN37Q96GY3 246 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-212ENST00000523387 PECRQ9BY49 303 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 GPR173Q9NS66 373 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 TGIF2-C20orf24A0A0A6YYL0 155 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 SHISA8B8ZZ34 492 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 CLDN34H7C241 214 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 GEMIN2O14893 280 aaKnown RBP7.98□□□□□ -1.13
CSMD1-212ENST00000523387 ST8SIA5O15466 376 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 IGHV2-70P01814 119 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 LCATP04180 440 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 FCARP24071 287 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 MALLQ13021 153 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 BATF2Q8N1L9 274 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 OR2C3Q8N628 320 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 DEFB119Q8N690 84 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 OR8B12Q8NGG6 310 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 ZNF296Q8WUU4 475 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-212ENST00000523387 NAA60Q9H7X0 242 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 LMAN1LQ9HAT1 526 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 CENPFP49454 3210 aa7.98□□□□□ -1.13
CSMD1-212ENST00000523387 PPP5D1E7EU14 171 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 H0YIG0 161 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 MBPP02686 304 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-212ENST00000523387 ISG15P05161 165 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 RRADP55042 308 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 TMEM196Q5HYL7 178 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 PYY3Q5JQD4 70 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 PLAC9Q5JTB6 97 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 FAM69BQ5VUD6 431 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 RTN4RL2Q86UN3 420 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 THNSL2Q86YJ6 484 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 C20orf196Q8IYI0 205 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 CYB561D1Q8N8Q1 229 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 LIPHQ8WWY8 451 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 TAAR9Q96RI9 348 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 HDHD3Q9BSH5 251 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-212ENST00000523387 FBRSQ9HAH7 460 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 DKKL1Q9UK85 242 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 CA14Q9ULX7 337 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 LAMP3Q9UQV4 416 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 SCN5AQ14524 2016 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 IGHV3-20A0A0C4DH32 117 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-212ENST00000523387 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-212ENST00000523387 TMEM14DPA8MWL7 114 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 NPIPA2E9PIF3 369 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 NPIPA3F8WFD2 350 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 HLA-HP01893 362 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 CSNK1A1P48729 337 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 HLA-DRB3P79483 266 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 IL13RA2Q14627 380 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 ZNF385CQ66K41 422 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-212ENST00000523387 BRICD5Q6PL45 260 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 REC114Q7Z4M0 266 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 PAQR4Q8N4S7 273 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-212ENST00000523387 OR5C1Q8NGR4 320 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 RTBDNQ9BSG5 229 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-212ENST00000523387 IER2Q9BTL4 223 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 FAAP24Q9BTP7 215 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 MMACHCQ9Y4U1 282 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 ARHGEF17Q96PE2 2063 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-212ENST00000523387 A0A1W2PNR3 127 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 H3BP45 60 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 TGFBR3LH3BV60 316 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 SERPINE2P07093 398 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 CELA2BP08218 269 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-212ENST00000523387 IL11P20809 199 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 STARD6P59095 220 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 YPEL5P62699 121 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 SRPXP78539 464 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 MFAP5Q13361 173 aa7.97□□□□□ -1.13
CSMD1-212ENST00000523387 ZNF705AQ6ZN79 300 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-212ENST00000523387 APCDD1LQ8NCL9 501 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms