RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 C1RLQ9NZP8 487 aa10.15□□□□□ -0.78
VEGFA-223ENST00000523125 GTF2A1LQ9UNN4 478 aa10.15□□□□□ -0.78
VEGFA-223ENST00000523125 MMP24Q9Y5R2 645 aa10.15□□□□□ -0.78
VEGFA-223ENST00000523125 DHRS7CA6NNS2 312 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 E9PQ18 207 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 H3BNX3 289 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 RPP14O95059 124 aaKnown RBP10.14□□□□□ -0.79
VEGFA-223ENST00000523125 PGA5P0DJD9 388 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 NDUFB7P17568 137 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 HAAOP46952 286 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 KLRD1Q13241 179 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 PRR31Q5SQ13 230 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 ZNF573Q86YE8 665 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 CALHM1Q8IU99 346 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 CMTM4Q8IZR5 234 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 YIPF7Q8N8F6 280 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 OR8J1Q8NGP2 316 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 RBM4BQ9BQ04 359 aaKnown RBP10.14□□□□□ -0.79
VEGFA-223ENST00000523125 SLITRK2Q9H156 845 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 ZNF696Q9H7X3 374 aa10.14□□□□□ -0.79
VEGFA-223ENST00000523125 METTL15A6NJ78 407 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 RFPL4AA6NLU0 287 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 RFPL4AL1F8VTS6 287 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 J3QT63 122 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 M0R1W7 72 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 CIB2O75838 187 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 SULT1C4O75897 302 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 NDUFA7O95182 113 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 ALPLP05186 524 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 KRT8P05787 483 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 MPZP25189 248 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 RAG2P55895 527 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 ISL1P61371 349 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 ERVK11-1P61568 191 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 ZNF85Q03923 595 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 TMED1Q13445 227 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 UBE2V2Q15819 145 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 ODF4Q2M2E3 257 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 HCP5Q6MZN7 132 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 PRSS35Q8N3Z0 413 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 PNKDQ8N490 385 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 TBC1D15Q8TC07 691 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 NPRL2Q8WTW4 380 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 DYRK2Q92630 601 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 NRIP2Q9BQI9 281 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 HES4Q9HCC6 221 aa10.13□□□□□ -0.79
VEGFA-223ENST00000523125 CMYA5Q8N3K9 4069 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 TRBV23-1A0A0A0MS06 115 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 A0A1W2PRD5 423 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 A0A1W2PRF3 423 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 A0A1W2PRM7 423 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 H3BSH0 61 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 J3QRE1 110 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 NPFFO15130 113 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 GPR137BO60478 399 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 CRYBA1P05813 215 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 PRDX2P32119 198 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 CEBPDP49716 269 aaPredicted RBP10.12□□□□□ -0.79
VEGFA-223ENST00000523125 UBE2E1P51965 193 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 RPL15P61313 204 aaKnown RBP10.12□□□□□ -0.79
VEGFA-223ENST00000523125 GUCA2AQ02747 115 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 SRSF4Q08170 494 aaKnown RBP10.12□□□□□ -0.79
VEGFA-223ENST00000523125 KPNB1Q14974 876 aaKnown RBP10.12□□□□□ -0.79
VEGFA-223ENST00000523125 TAF9Q16594 264 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 SMIM21Q3B7S5 101 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 ANGPTL5Q86XS5 388 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 C11orf42Q8N5U0 333 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 TMEM185AQ8NFB2 350 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 OR10H4Q8NGA5 316 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 OR4F5Q8NH21 305 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 WFDC12Q8WWY7 111 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 AJUBAQ96IF1 538 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 HRASLS5Q96KN8 279 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 METTL8Q9H825 291 aaKnown RBP10.12□□□□□ -0.79
VEGFA-223ENST00000523125 C19orf12Q9NSK7 152 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 USE1Q9NZ43 259 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 ZNRD1Q9P1U0 126 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 FAM96BQ9Y3D0 163 aa10.12□□□□□ -0.79
VEGFA-223ENST00000523125 IGKV1-27A0A075B6S5 117 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 A0A1B0GUS0 222 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 A0A1W2PQ09 198 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 ANKRD61A6NGH8 418 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 F8VVB4 439 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 F8VWA3 439 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 EI24O14681 340 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 SYT7O43581 403 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 ENTPD6O75354 484 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 NXPH2O95156 264 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 FBP1P09467 338 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 EEF1B2P24534 225 aaKnown RBP10.11□□□□□ -0.79
VEGFA-223ENST00000523125 SAA4P35542 130 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 KIR3DL2P43630 455 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 CDC42P60953 191 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 TP53I3Q53FA7 332 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 SLC25A30Q5SVS4 291 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 TMEM200BQ69YZ2 307 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 BATF2Q8N1L9 274 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 ZNF561Q8N587 486 aa10.11□□□□□ -0.79
VEGFA-223ENST00000523125 TRMT10AQ8TBZ6 339 aaKnown RBP10.11□□□□□ -0.79
VEGFA-223ENST00000523125 TRUB1Q8WWH5 349 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms