RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 REEP1Q9H902 201 aa7.62□□□□□ -1.19
SDC2-207ENST00000522911 SEBOXQ9HB31 216 aaPredicted RBP7.62□□□□□ -1.19
SDC2-207ENST00000522911 SNTG1Q9NSN8 517 aa7.62□□□□□ -1.19
SDC2-207ENST00000522911 VNN3Q9NY84 501 aa7.62□□□□□ -1.19
SDC2-207ENST00000522911 USE1Q9NZ43 259 aa7.62□□□□□ -1.19
SDC2-207ENST00000522911 DNAJC27Q9NZQ0 273 aa7.62□□□□□ -1.19
SDC2-207ENST00000522911 DNAJB9Q9UBS3 223 aa7.62□□□□□ -1.19
SDC2-207ENST00000522911 PITPNC1Q9UKF7 332 aa7.62□□□□□ -1.19
SDC2-207ENST00000522911 SAMHD1Q9Y3Z3 626 aaKnown RBP7.62□□□□□ -1.19
SDC2-207ENST00000522911 TBL2Q9Y4P3 447 aaKnown RBP7.62□□□□□ -1.19
SDC2-207ENST00000522911 N6AMT1Q9Y5N5 214 aa7.62□□□□□ -1.19
SDC2-207ENST00000522911 NOTCH3Q9UM47 2321 aa7.62□□□□□ -1.19
SDC2-207ENST00000522911 FAM183AA6NL82 134 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 PRR23D1E9PI22 279 aaPredicted RBP7.61□□□□□ -1.19
SDC2-207ENST00000522911 CASQ2O14958 399 aaPredicted RBP7.61□□□□□ -1.19
SDC2-207ENST00000522911 PIN1P1O15428 100 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 ZNF254O75437 659 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 RHBDL1O75783 438 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 PGA5P0DJD9 388 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 PRR23D2P0DMB1 279 aaPredicted RBP7.61□□□□□ -1.19
SDC2-207ENST00000522911 ATP6V1B2P21281 511 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 SLC2A5P22732 501 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 MPZP25189 248 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 GPM6AP51674 278 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 DLX1P56177 255 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 ERVFRD-1P60508 538 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 RPL31P62899 125 aaKnown RBP7.61□□□□□ -1.19
SDC2-207ENST00000522911 TRIM25Q14258 630 aaKnown RBP7.61□□□□□ -1.19
SDC2-207ENST00000522911 GFOD2Q3B7J2 385 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 FAM98BQ52LJ0 330 aaKnown RBP7.61□□□□□ -1.19
SDC2-207ENST00000522911 TMEM42Q69YG0 159 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 TMEM200BQ69YZ2 307 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 KCTD18Q6PI47 426 aaPredicted RBP7.61□□□□□ -1.19
SDC2-207ENST00000522911 ACP7Q6ZNF0 438 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 THAP5Q7Z6K1 395 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 NDUFA11Q86Y39 141 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 MKXQ8IYA7 352 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 DEFB107AQ8IZN7 70 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 PNKDQ8N490 385 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 WFDC9Q8NEX5 89 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 C17orf50Q8WW18 174 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 PIGCQ92535 297 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 FEVQ99581 238 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 NIPSNAP1Q9BPW8 284 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 MED20Q9H944 212 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 ZNF702PQ9H963 129 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 HES4Q9HCC6 221 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 SERTAD4Q9NUC0 356 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 FAM206AQ9NX38 181 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 NUFIP1Q9UHK0 495 aaKnown RBP7.61□□□□□ -1.19
SDC2-207ENST00000522911 FOXJ3Q9UPW0 622 aa7.61□□□□□ -1.19
SDC2-207ENST00000522911 COL7A1Q02388 2944 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 A0A1W2PRD5 423 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 A0A1W2PRF3 423 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 A0A1W2PRM7 423 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 ADARB2-AS1A8MUL3 147 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 C17orf98A8MV24 154 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 ODF3BA8MYP8 253 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 ZNF732B4DXR9 585 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 SLC1A7O00341 560 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 DLGAP1O14490 977 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 ANGPTL7O43827 346 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 CHST1O43916 411 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 HMGN1P05114 100 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 RAP2AP10114 183 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 FAHP16930 419 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 POU1F1P28069 291 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 GABRA2P47869 451 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 DLX6P56179 175 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 ERVK11-1P61568 191 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 CDK5Q00535 292 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 PRB3Q04118 309 aaPredicted RBP7.6□□□□□ -1.19
SDC2-207ENST00000522911 RIPPLY1Q0D2K3 151 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 ZNF626Q68DY1 528 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 CYP2R1Q6VVX0 501 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 KCTD8Q6ZWB6 473 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 ZNF573Q86YE8 665 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 TMEM185AQ8NFB2 350 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 OR4F17Q8NGA8 305 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 OR10G2Q8NGC3 310 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 OR11H6Q8NGC7 330 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 GIPC3Q8TF64 312 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 THEM6Q8WUY1 208 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 MALSU1Q96EH3 234 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 CLPTM1LQ96KA5 538 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 LRGUKQ96M69 825 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 OR4F4Q96R69 305 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 NRIP2Q9BQI9 281 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 BRD7Q9NPI1 651 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 C19orf12Q9NSK7 152 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 NECAP2Q9NVZ3 263 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 TCF19Q9Y242 345 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 POLDIP2Q9Y2S7 368 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 SIGLEC9Q9Y336 463 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 TMEM14AQ9Y6G1 99 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 DNAH9Q9NYC9 4486 aa7.6□□□□□ -1.19
SDC2-207ENST00000522911 NBEAL2Q6ZNJ1 2754 aa7.59□□□□□ -1.19
SDC2-207ENST00000522911 TMEM269A0A1B0GVZ9 245 aa7.59□□□□□ -1.19
SDC2-207ENST00000522911 A6NDX4 124 aa7.59□□□□□ -1.19
SDC2-207ENST00000522911 RFPL4AA6NLU0 287 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms