RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 CLIC3O95833 236 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 FBP1P09467 338 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 KITLGP21583 273 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 CDAP32320 146 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 SLC15A1P46059 708 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 RPL5P46777 297 aaKnown RBP5.35□□□□□ -1.55
SDCBP-210ENST00000522843 ALDH3B2P48448 385 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 RPS16P62249 146 aaKnown RBP5.35□□□□□ -1.55
SDCBP-210ENST00000522843 SLC35A2P78381 396 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 HSF2Q03933 536 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 TMED1Q13445 227 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 SRSF7Q16629 238 aaKnown RBP eCLIP5.35□□□□□ -1.55
SDCBP-210ENST00000522843 ZBED5Q49AG3 693 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 METTL11BQ5VVY1 283 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 C11orf88Q6PI97 169 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 TTC33Q6PID6 262 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-210ENST00000522843 DCDC5Q6ZRR9 648 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 SLC35D2Q76EJ3 337 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 RNF144BQ7Z419 303 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 VMO1Q7Z5L0 202 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 DPPA2Q7Z7J5 298 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 MOGAT3Q86VF5 341 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 EGFL6Q8IUX8 553 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 ENTHD1Q8IYW4 607 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 FGFRL1Q8N441 504 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 TSPAN14Q8NG11 270 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 OR10AD1Q8NGE0 317 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 TMEM255BQ8WV15 326 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 C17orf50Q8WW18 174 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 APH1BQ8WW43 257 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 DDB2Q92466 427 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 MCHR2Q969V1 340 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 BPIFA2Q96DR5 249 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 Q96MT0 163 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 GPX7Q96SL4 187 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-210ENST00000522843 DDOQ99489 341 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 MRPS26Q9BYN8 205 aaKnown RBP5.35□□□□□ -1.55
SDCBP-210ENST00000522843 RIBC2Q9H4K1 309 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 ZNF702PQ9H963 129 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 C20orf141Q9NUB4 165 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 MRPL39Q9NYK5 338 aaKnown RBP5.35□□□□□ -1.55
SDCBP-210ENST00000522843 SELENONQ9NZV5 590 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 EIF3KQ9UBQ5 218 aaKnown RBP5.35□□□□□ -1.55
SDCBP-210ENST00000522843 RPS6KB2Q9UBS0 482 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 BLOC1S6Q9UL45 172 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 SIGLEC7Q9Y286 467 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 TPRKBQ9Y3C4 175 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 CDH10Q9Y6N8 788 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 LOC102723971A0A1B0GUV8 181 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 A0A1W2PRD5 423 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 A0A1W2PRF3 423 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 A0A1W2PRM7 423 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 EFCAB9A8MZ26 197 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 H3BUX3 64 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 IFNL4K9M1U5 179 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 BHLHE40O14503 412 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 CDC42EP2O14613 210 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 MLNRO43193 412 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 SLC2A10O95528 541 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 TXNDC12O95881 172 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 MT-ATP6P00846 226 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 LIPFP07098 398 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 GRPP07492 148 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 ASAH2BP0C7U1 165 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 SMIM18P0DKX4 95 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 PIPP12273 146 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-210ENST00000522843 IFI30P13284 250 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 FUT1P19526 365 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 PAX6P26367 422 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 GRK5P34947 590 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 GDI2P50395 445 aaKnown RBP5.34□□□□□ -1.55
SDCBP-210ENST00000522843 ZNF133P52736 654 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-210ENST00000522843 FXYD6P3P58550 94 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 KLRD1Q13241 179 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 GINS1Q14691 196 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 LY6EQ16553 131 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 ZNF181Q2M3W8 571 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 CLEC12AQ5QGZ9 265 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 ZNF773Q6PK81 442 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 SMARCD3Q6STE5 483 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 DPY19L2P2Q6ZN68 376 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 KRT77Q7Z794 578 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 LRRC75AQ8NAA5 344 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 OR4C13Q8NGP0 309 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 OR5R1Q8NH85 324 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 OR2T6Q8NHC8 308 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 DPF1Q92782 380 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 TNFRSF14Q92956 283 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 RFKQ969G6 155 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 HAVCR1Q96D42 359 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 CMBLQ96DG6 245 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 SGTBQ96EQ0 304 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 SLC25A44Q96H78 314 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-210ENST00000522843 C4orf45Q96LM5 186 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 TECTBQ96PL2 329 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 ASCL2Q99929 193 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 TEX12Q9BXU0 123 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 MRPL13Q9BYD1 178 aaKnown RBP5.34□□□□□ -1.55
SDCBP-210ENST00000522843 OR2H1Q9GZK4 316 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 FN3KQ9H479 309 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms