RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ERGP11308 486 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 TCN2P20062 427 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 CHRNB4P30926 498 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 CCR7P32248 378 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 FGF8P55075 233 aaPredicted RBP3.11□□□□□ -1.91
SKP1-209ENST00000522552 PRDX1Q06830 199 aaKnown RBP3.11□□□□□ -1.91
SKP1-209ENST00000522552 POU6F1Q14863 301 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 TTC32Q5I0X7 151 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 C1orf195Q5TG92 126 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 GPR26Q8NDV2 337 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 OR10J5Q8NHC4 309 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 Q8WTZ3 238 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 DYDC1Q8WWB3 177 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 GEMIN6Q8WXD5 167 aaKnown RBP3.11□□□□□ -1.91
SKP1-209ENST00000522552 ASB17Q8WXJ9 295 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 ZNF597Q96LX8 424 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 OR2V2Q96R30 315 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 PITX2Q99697 317 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 TMED9Q9BVK6 235 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 GABARAPL3Q9BY60 117 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 C11orf49Q9H6J7 331 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 ISG20L2Q9H9L3 353 aaKnown RBP3.11□□□□□ -1.91
SKP1-209ENST00000522552 RRAGDQ9NQL2 400 aaPredicted RBP3.11□□□□□ -1.91
SKP1-209ENST00000522552 ARMCX1Q9P291 453 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 VPREB3Q9UKI3 123 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 NDRG2Q9UN36 371 aaKnown RBP3.11□□□□□ -1.91
SKP1-209ENST00000522552 TRAPPC4Q9Y296 219 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 SLC25A15Q9Y619 301 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 NCOA3Q9Y6Q9 1424 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 A0A1W2PP64 1363 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 IGHV7-81A0A0B4J1V7 117 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 CNMDO75829 334 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 VENTXO95231 258 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 DHFRP00374 187 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 MRPL3P09001 348 aaKnown RBP3.1□□□□□ -1.91
SKP1-209ENST00000522552 GNB3P16520 340 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 PSMB9P28065 219 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 SERPINB1P30740 379 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 CD70P32970 193 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 ACOT2P49753 483 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 ERFP50548 548 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 GTF2A1P52655 376 aaPredicted RBP3.1□□□□□ -1.91
SKP1-209ENST00000522552 KIAA0087Q14695 138 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 HIST3H3Q16695 136 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 ZNF718Q3SXZ3 478 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 OR2B11Q5JQS5 317 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 ZNF506Q5JVG8 444 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 STPG1Q5TH74 334 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 LAMTOR1Q6IAA8 161 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 TNFAIP8L2Q6P589 184 aaPredicted RBP3.1□□□□□ -1.91
SKP1-209ENST00000522552 TEX43Q6ZNM6 134 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 LINC00173Q6ZV60 143 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 SLC36A1Q7Z2H8 476 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 FAM220AQ7Z4H9 259 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 NKAPP1Q8N9T2 125 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 OR6T1Q8NGN1 323 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 OR1P1Q8NH06 330 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 VN1R17PQ8TDU5 208 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 SRSF12Q8WXF0 261 aaKnown RBP3.1□□□□□ -1.91
SKP1-209ENST00000522552 HAUS1Q96CS2 278 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 FCRL1Q96LA6 429 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 DDA1Q9BW61 102 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 HHLA2Q9UM44 414 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 C14orf166Q9Y224 244 aaKnown RBP3.1□□□□□ -1.91
SKP1-209ENST00000522552 NDUFAF1Q9Y375 327 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 COX11Q9Y6N1 276 aa3.1□□□□□ -1.91
SKP1-209ENST00000522552 CCDC144AA2RUR9 1427 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 PMS2P5A8MQ11 134 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 ZNF878C9JN71 531 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 TCAPO15273 167 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 REM1O75628 298 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 DUS4LO95620 317 aaKnown RBP3.09□□□□□ -1.91
SKP1-209ENST00000522552 MOSP00540 346 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 IFNA21P01568 189 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 GUSBP08236 651 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 NBEAP1P0C6P0 100 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 WARSP23381 471 aaKnown RBP3.09□□□□□ -1.91
SKP1-209ENST00000522552 TAS2R43P59537 309 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 REG3AQ06141 175 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 PON3Q15166 354 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 NHLRC3Q5JS37 347 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 CLEC12AQ5QGZ9 265 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 SFXN4Q6P4A7 337 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 TMEM144Q7Z5S9 345 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 PHF13Q86YI8 300 aaPredicted RBP3.09□□□□□ -1.91
SKP1-209ENST00000522552 ARIH2OSQ8N7S6 290 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 C4orf32Q8N8J7 132 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 WDSUB1Q8N9V3 476 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 CSNK1G2-AS1Q8NCQ2 148 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 EEF1AKMT1Q8WVE0 214 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 METTL26Q96S19 204 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 SUCNR1Q9BXA5 334 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 FAM107BQ9H098 131 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 OR51E2Q9H255 320 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 TPK1Q9H3S4 243 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 ZNF430Q9H8G1 570 aaPredicted RBP3.09□□□□□ -1.91
SKP1-209ENST00000522552 MYOZ1Q9NP98 299 aaPredicted RBP3.09□□□□□ -1.91
SKP1-209ENST00000522552 DPM3Q9P2X0 92 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
SKP1-209ENST00000522552 LSM5Q9Y4Y9 91 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms