RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SP1P08047 785 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 PCMT1P22061 227 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 SLC37A1P57057 533 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 BAP18Q8IXM2 172 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 ZNF441Q8N8Z8 693 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 RFESDQ8TAC1 157 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 PARP12Q9H0J9 701 aaKnown RBP14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 AUNIPQ9H7T9 357 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 UBTD1Q9HAC8 227 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 SAP30LQ9HAJ7 183 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 SIRT3Q9NTG7 399 aaPredicted RBP14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 CTLA4P16410 223 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 CEACAM6P40199 344 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 TMPRSS3P57727 454 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 PSG6Q00889 435 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 TLE1Q04724 770 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 ENDOGQ14249 297 aaKnown RBP14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 ETFRF1Q6IPR1 90 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 CD300LDQ6UXZ3 194 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 DPF1Q92782 380 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 ARAP2Q8WZ64 1704 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 ZNF785A8K8V0 405 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 TMEM128Q5BJH2 165 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 MSRB3Q8IXL7 192 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 LRRC3BQ96PB8 259 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 SRRQ9GZT4 340 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 ZNF835Q9Y2P0 537 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 PDCD6O75340 191 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 KRASP01116 189 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 CCL3P10147 92 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 SLC25A35Q3KQZ1 300 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 Q56UQ5 140 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 SPRED2Q7Z698 418 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 PLPPR2Q96GM1 343 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 MED30Q96HR3 178 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 FKBP11Q9NYL4 201 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 FGF9P31371 208 aaPredicted RBP14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 TGFBR1P36897 503 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 HMGA2P52926 109 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 NDUFA6P56556 154 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 BTNL8Q6UX41 500 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 OR52N4Q8NGI2 321 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 OR5B3Q8NH48 314 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 GRAMD2BQ96HH9 432 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 GDF15Q99988 308 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 CHRDL1Q9BU40 450 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 OR5V1Q9UGF6 321 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 ASPDHA6ND91 283 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 ADAM10O14672 748 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 AQP8O94778 261 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 CDKN2AP42771 156 aaKnown RBP14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 P2RX3P56373 397 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 TIPARPQ7Z3E1 657 aaKnown RBP14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 NEIL1Q96FI4 390 aaPredicted RBP14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 MAGT1Q9H0U3 335 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 TMEFF2Q9UIK5 374 aaPredicted RBP14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 FLVCR2Q9UPI3 526 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 SCN1AP35498 2009 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 ZNF727A8MUV8 499 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 CYR61O00622 381 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 LIMS3P0CW19 117 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 LIMS4P0CW20 117 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 KIR2DS2P43631 304 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 MLF1P58340 268 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 OR4F5Q8NH21 305 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 OR4F4Q96R69 305 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 IL36GQ9NZH8 169 aa14.43□□□□□ -0.1
PCDHA3-201ENST00000522353 CHEK1O14757 476 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 EML2O95834 649 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 PDGFBP01127 241 aaPredicted RBP14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 SLC25A6P12236 298 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 ZNF239Q16600 458 aaKnown RBP14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 AHCTF1Q8WYP5 2266 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 GMPPAQ96IJ6 420 aaPredicted RBP14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 MOGAT1Q96PD6 335 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 SEBOXQ9HB31 216 aaPredicted RBP14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 PSG11Q9UQ72 335 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 ABCA3Q99758 1704 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 A0A1W2PN81 502 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 CHRNA7P36544 502 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 MNX1P50219 401 aaPredicted RBP14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 KRTCAP3Q53RY4 240 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 FAM27D1Q5T7N8 215 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 ADTRPQ96IZ2 230 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 PATE4P0C8F1 98 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 RRASP10301 218 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 CCL2P13500 99 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 UBE2MP61081 183 aaKnown RBP14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 ZNF787Q6DD87 383 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 ZNF275Q9NSD4 429 aaPredicted RBP14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 C1RLQ9NZP8 487 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 UMAD1C9J7I0 102 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 ZFPL1O95159 310 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 CST2P09228 141 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 HIST1H1DP16402 221 aaKnown RBP14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 HNF1AP20823 631 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 CD80P33681 288 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 DEFA6Q01524 100 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 CD226Q15762 336 aa14.42□□□□□ -0.1
PCDHA3-201ENST00000522353 BAK1Q16611 211 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms