RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 DTX3Q8N9I9 347 aa18.14■□□□□ 0.49
R3HCC1-208ENST00000522012 PXT1Q8NFP0 134 aa18.14■□□□□ 0.49
R3HCC1-208ENST00000522012 KCNG3Q8TAE7 436 aa18.14■□□□□ 0.49
R3HCC1-208ENST00000522012 SLAMF9Q96A28 289 aa18.14■□□□□ 0.49
R3HCC1-208ENST00000522012 CMTM3Q96MX0 182 aa18.14■□□□□ 0.49
R3HCC1-208ENST00000522012 GAL3ST1Q99999 423 aa18.14■□□□□ 0.49
R3HCC1-208ENST00000522012 PKIBQ9C010 78 aa18.14■□□□□ 0.49
R3HCC1-208ENST00000522012 CST11Q9H112 138 aa18.14■□□□□ 0.49
R3HCC1-208ENST00000522012 BANF2Q9H503 90 aa18.14■□□□□ 0.49
R3HCC1-208ENST00000522012 RHBDL2Q9NX52 303 aa18.14■□□□□ 0.49
R3HCC1-208ENST00000522012 RAB22AQ9UL26 194 aa18.14■□□□□ 0.49
R3HCC1-208ENST00000522012 UBR5O95071 2799 aaPredicted RBP18.14■□□□□ 0.49
R3HCC1-208ENST00000522012 ADGRG4Q8IZF6 3080 aa18.14■□□□□ 0.49
R3HCC1-208ENST00000522012 A6NLC8 198 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 TMEM14DPA8MWL7 114 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 J3QT63 122 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 CDIPTO14735 213 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 HS3ST1O14792 307 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 HTR3BO95264 441 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 MPIG6BO95866 241 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 CD200P41217 278 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 TNFAIP6P98066 277 aaPredicted RBP18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 UNC119Q13432 240 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 MADCAM1Q13477 382 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 SPANXN2Q5MJ10 180 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 CCDC190Q86UF4 302 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 SAXO1Q8IYX7 474 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 BATF2Q8N1L9 274 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 TMEM104Q8NE00 496 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 AQP3Q92482 292 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 OR2V2Q96R30 315 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 ATG5Q9H1Y0 275 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 UFSP2Q9NUQ7 469 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 EXTL2Q9UBQ6 330 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 CADP27708 2225 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 A0A1W2PP11 408 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 C17orf100A8MU93 164 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 KDM4BO94953 1096 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 CSTBP04080 98 aaKnown RBP18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 RAB6AP20340 208 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 TALDO1P37837 337 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 SRP9P49458 86 aaKnown RBP18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 IL24Q13007 206 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 GPR176Q14439 515 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 SP5Q6BEB4 398 aaPredicted RBP18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 ZCCHC24Q8N2G6 241 aaKnown RBP18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 S100ZQ8WXG8 99 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 RAB40AQ8WXH6 277 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 S100A16Q96FQ6 103 aaKnown RBP18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 MEGF10Q96KG7 1140 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 DIRC2Q96SL1 478 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 ABCG5Q9H222 651 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 AKIP1Q9NQ31 210 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 FBLN5Q9UBX5 448 aa18.13■□□□□ 0.49
R3HCC1-208ENST00000522012 A0A1W2PPR1 153 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 FABP12A6NFH5 140 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 TRAPPC2LH3BP13 241 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 CDC14BO60729 498 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 ZNF780AO75290 641 aaPredicted RBP18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 RHBDL1O75783 438 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 MPZP25189 248 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 SNRPD2P62316 118 aaKnown RBP18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 MPPED2Q15777 294 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 SWI5Q1ZZU3 235 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 TMEM200AQ86VY9 491 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 OR4M1Q8NGD0 313 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 ITLN1Q8WWA0 313 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 PTX4Q96A99 478 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 TMEM59Q9BXS4 323 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 MS4A5Q9H3V2 200 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 PCDHB16Q9NRJ7 776 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 MTCH1Q9NZJ7 389 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 POLDIP2Q9Y2S7 368 aa18.12■□□□□ 0.49
R3HCC1-208ENST00000522012 CLDN25C9JDP6 229 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 TPD52L2O43399 206 aaKnown RBP18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 GOSR1O95249 250 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 SFTPBP07988 381 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 MGMTP16455 207 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 BCL3P20749 454 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 NPBWR2P48146 333 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 SPRNQ5BIV9 151 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 FAM131AQ6UXB0 335 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 ZNF826PQ6ZT77 177 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 C11orf53Q8IXP5 236 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 MFSD4AQ8N468 514 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 CELF2-AS1Q8N7Q2 184 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 PHF21AQ96BD5 680 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 ZNF488Q96MN9 340 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 UBTD1Q9HAC8 227 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 HMG20AQ9NP66 347 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 FAIMQ9NVQ4 179 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 C1orf123Q9NWV4 160 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 IL36GQ9NZH8 169 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 IL19Q9UHD0 177 aa18.11■□□□□ 0.49
R3HCC1-208ENST00000522012 CTAG2O75638 210 aa18.1■□□□□ 0.49
R3HCC1-208ENST00000522012 INHBBP09529 407 aa18.1■□□□□ 0.49
R3HCC1-208ENST00000522012 GTF2F2P13984 249 aa18.1■□□□□ 0.49
R3HCC1-208ENST00000522012 COX6B1P14854 86 aa18.1■□□□□ 0.49
R3HCC1-208ENST00000522012 AGAP6Q5VW22 663 aa18.1■□□□□ 0.49
R3HCC1-208ENST00000522012 BIVMQ86UB2 503 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms