RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 DOCK5Q9H7D0 1870 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 SLC17A2O00624 439 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 COX5AP20674 150 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 SLC37A1P57057 533 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 PSG6Q00889 435 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 GAB4Q2WGN9 574 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 C4orf17Q53FE4 359 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 OR4C5Q8NGB2 326 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 OR4F5Q8NH21 305 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 OR2AE1Q8NHA4 323 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 NTNG2Q96CW9 530 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 OR4F4Q96R69 305 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 TRAF4Q9BUZ4 470 aaPredicted RBP14.43□□□□□ -0.1
USP42-207ENST00000521713 SHARPINQ9H0F6 387 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 PILRBQ9UKJ0 227 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 TRAF3IP2O43734 574 aaPredicted RBP14.43□□□□□ -0.1
USP42-207ENST00000521713 PRSS23O95084 383 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 CNIH1O95406 144 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 HNRNPA3P51991 378 aaKnown RBP14.43□□□□□ -0.1
USP42-207ENST00000521713 ELLP55199 621 aaPredicted RBP14.43□□□□□ -0.1
USP42-207ENST00000521713 FAAP20Q6NZ36 180 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 SF3B5Q9BWJ5 86 aaKnown RBP14.43□□□□□ -0.1
USP42-207ENST00000521713 FOXJ3Q9UPW0 622 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 CLDN34H7C241 214 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 GATCO43716 136 aaKnown RBP14.43□□□□□ -0.1
USP42-207ENST00000521713 HIST1H3AP68431 136 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 Q8IYB0 196 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 SLC24A4Q8NFF2 622 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 ZNF501Q96CX3 271 aaPredicted RBP14.43□□□□□ -0.1
USP42-207ENST00000521713 SUCNR1Q9BXA5 334 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 KLK11Q9UBX7 282 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 LAMP3Q9UQV4 416 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 SSUH2Q9Y2M2 353 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 IGHV3-64DA0A0J9YX35 117 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 FTH1P19P0C7X4 201 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 SLC6A1P30531 599 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 ZNF626Q68DY1 528 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 CD300LDQ6UXZ3 194 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 NUFIP2Q7Z417 695 aaKnown RBP14.42□□□□□ -0.1
USP42-207ENST00000521713 ZFP62Q8NB50 900 aaPredicted RBP14.42□□□□□ -0.1
USP42-207ENST00000521713 PINX1Q96BK5 328 aaKnown RBP14.42□□□□□ -0.1
USP42-207ENST00000521713 ZNF426Q9BUY5 554 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 M0QZK8 103 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 GGCTO75223 188 aaKnown RBP14.42□□□□□ -0.1
USP42-207ENST00000521713 ATF1P18846 271 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 HRH1P35367 487 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 GNG3P63215 75 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 CDK5Q00535 292 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 SLC22A18ASQ8N1D0 253 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 BATF2Q8N1L9 274 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 RBMXL3Q8N7X1 1067 aaKnown RBP14.42□□□□□ -0.1
USP42-207ENST00000521713 CIB3Q96Q77 187 aaPredicted RBP14.42□□□□□ -0.1
USP42-207ENST00000521713 RAB18Q9NP72 206 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 C20orf141Q9NUB4 165 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 ZNF468Q5VIY5 522 aaPredicted RBP14.42□□□□□ -0.1
USP42-207ENST00000521713 OR10X1Q8NGY0 326 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 MARCH1Q8TCQ1 289 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 HGDQ93099 445 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 SPACA5Q96QH8 159 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 LRP12Q9Y561 859 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 FAM90A27PA6NNH2 459 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 FABP4P15090 132 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 SUB1P53999 127 aaKnown RBP eCLIP14.42□□□□□ -0.1
USP42-207ENST00000521713 SLC25A35Q3KQZ1 300 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 LCN15Q6UWW0 184 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 SLC38A6Q8IZM9 456 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 OR52B4Q8NGK2 314 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 EDARADDQ8WWZ3 215 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 NRTNQ99748 197 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 SLC35B3Q9H1N7 401 aa14.42□□□□□ -0.1
USP42-207ENST00000521713 FOXS1O43638 330 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 ZNF83P51522 516 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 TAS2R45P59539 299 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 ZNF429Q86V71 674 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 ZDHHC11Q9H8X9 412 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 PLPP2O43688 288 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 LRP3O75074 770 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 LIMS3P0CW19 117 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 LIMS4P0CW20 117 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 DEFA4P12838 97 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 Q3ZCU0 254 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 OR8G2PQ6IF36 304 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 MOB1BQ7L9L4 216 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 ESRP2Q9H6T0 727 aaKnown RBP14.41□□□□□ -0.1
USP42-207ENST00000521713 ST3GAL6Q9Y274 331 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 PLPP3O14495 311 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 FAHP16930 419 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 GPR12P47775 334 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 TMEM183BQ1AE95 376 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 H2BFWTQ7Z2G1 175 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 OSR2Q8N2R0 312 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 OR13G1Q8NGZ3 307 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 PTPMT1Q8WUK0 201 aaPredicted RBP14.41□□□□□ -0.1
USP42-207ENST00000521713 MCHR2Q969V1 340 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 MTFP1Q9UDX5 166 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 A0A1W2PPQ1 181 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 HSD17B6O14756 317 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 SSX1Q16384 188 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 OR6X1Q8NH79 312 aa14.41□□□□□ -0.1
USP42-207ENST00000521713 COL11A1P12107 1806 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms