RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 SCN5AQ14524 2016 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 A0A1B0GV50 99 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 A6NCN8 305 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 IGLON5A6NGN9 336 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 RAD51DO75771 328 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 IGHMP01871 453 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 BGLAPP02818 100 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 HNF1AP20823 631 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 DUSP1P28562 367 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 SFTPDP35247 375 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 CEBPGP53567 150 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 TMEM50BP56557 158 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 INSM1Q01101 510 aaPredicted RBP11.29□□□□□ -0.6
SMAD1-215ENST00000515385 PAX5Q02548 391 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 TLE4Q04727 773 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 ZNF77Q15935 545 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 FAM78AQ5JUQ0 283 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 FNDC7Q5VTL7 733 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 FBXW9Q5XUX1 488 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 TGIF2LYQ8IUE0 185 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 RERGQ96A58 199 aaPredicted RBP11.29□□□□□ -0.6
SMAD1-215ENST00000515385 GNPNAT1Q96EK6 184 aaPredicted RBP11.29□□□□□ -0.6
SMAD1-215ENST00000515385 SYT3Q9BQG1 590 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 CABLES2Q9BTV7 478 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 ST6GALNAC5Q9BVH7 336 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 ZNF700Q9H0M5 742 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 DECR2Q9NUI1 292 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 MYOFQ9NZM1 2061 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 TRAV36DV7A0A075B6V5 113 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 SDCBPO00560 298 aaPredicted RBP11.28□□□□□ -0.6
SMAD1-215ENST00000515385 GEMIN2O14893 280 aaKnown RBP11.28□□□□□ -0.6
SMAD1-215ENST00000515385 PQBP1O60828 265 aaKnown RBP11.28□□□□□ -0.6
SMAD1-215ENST00000515385 H2BFMP0C1H6 154 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 GNMTQ14749 295 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 ACKR1Q16570 336 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 SGCBQ16585 318 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 DNM1P34Q6PK57 102 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 ZNF248Q8NDW4 579 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 CLDND2Q8NHS1 167 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 TBL1XR1Q9BZK7 514 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 KIR2DL5BA0A0G2JN68 375 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 KIR2DL5BA0A0G2JPC4 375 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 SERPINE3A8MV23 424 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 PITX3O75364 302 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 CTLA4P16410 223 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 ZNF20P17024 532 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 FUT3P21217 361 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 SLC6A8P48029 635 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 RPL23AP62750 156 aaKnown RBP11.28□□□□□ -0.6
SMAD1-215ENST00000515385 C1orf189Q5VU69 101 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 SLC25A24Q6NUK1 477 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 BTNL3Q6UXE8 466 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 DGAT2L6Q6ZPD8 337 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 THNSL2Q86YJ6 484 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 KIR2DL5AQ8N109 375 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 FAM89BQ8N5H3 189 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 ADAT3Q96EY9 351 aaPredicted RBP11.28□□□□□ -0.6
SMAD1-215ENST00000515385 ARHGAP5-AS1Q96IT6 56 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 SPACA7Q96KW9 195 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 PYGO2Q9BRQ0 406 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 OR10A2Q9H208 303 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 LRFN1Q9P244 771 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 WNT6Q9Y6F9 365 aa11.28□□□□□ -0.6
SMAD1-215ENST00000515385 TRAV1-1A0A0B4J248 108 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 A0A0U1RQV5 110 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 XKRY2A2RUG3 117 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 CDC14CA4D256 554 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 HIDE1A8MVS5 230 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 ZNF732B4DXR9 585 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 LATO43561 262 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 CST2P09228 141 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 ZNF43P17038 809 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 ATP6V0CP27449 155 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 OR3A1P47881 315 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 HSF1Q00613 529 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 FOXF1Q12946 379 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 EIF3IQ13347 325 aaKnown RBP11.27□□□□□ -0.61
SMAD1-215ENST00000515385 SQSTM1Q13501 440 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 HERPUD1Q15011 391 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 FIGLAQ6QHK4 219 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 KLHL24Q6TFL4 600 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 GALNTL5Q7Z4T8 443 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 SLC26A10Q8NG04 563 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 HAS2Q92819 552 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 FOXN4Q96NZ1 517 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 PADI1Q9ULC6 663 aa11.27□□□□□ -0.61
SMAD1-215ENST00000515385 LOC102723971A0A1B0GUV8 181 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 C11orf98E9PRG8 122 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 NXPH2O95156 264 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 C8AP07357 584 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 CT45A8P0DMV1 189 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 CT45A9P0DMV2 189 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 EWSR1Q01844 656 aaKnown RBP eCLIP11.26□□□□□ -0.61
SMAD1-215ENST00000515385 TMEM187Q14656 261 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 TCTN1Q2MV58 587 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 CT45A2Q5DJT8 189 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 FBXW12Q6X9E4 464 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 RTN4RL2Q86UN3 420 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 FBXL14Q8N1E6 418 aa11.26□□□□□ -0.61
SMAD1-215ENST00000515385 ZFP62Q8NB50 900 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms