RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 SPANXA2-OT1Q8N9U9 137 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 FAM184AQ8NB25 1140 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 PROKR2Q8NFJ6 384 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 OR52K2Q8NGK3 314 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 OR6K6Q8NGW6 343 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 KLF14Q8TD94 323 aaPredicted RBP0.94□□□□□ -2.26
NEDD4-211ENST00000514893 GPX8Q8TED1 209 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 BAALCQ8WXS3 180 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 TFGQ92734 400 aaPredicted RBP0.94□□□□□ -2.26
NEDD4-211ENST00000514893 MRPL48Q96GC5 212 aaKnown RBP0.94□□□□□ -2.26
NEDD4-211ENST00000514893 UBE2E2Q96LR5 201 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 METTL26Q96S19 204 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 UTP23Q9BRU9 249 aaKnown RBP0.94□□□□□ -2.26
NEDD4-211ENST00000514893 STMN4Q9H169 189 aaPredicted RBP0.94□□□□□ -2.26
NEDD4-211ENST00000514893 CD209Q9NNX6 404 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 MRPS30Q9NP92 439 aaKnown RBP0.94□□□□□ -2.26
NEDD4-211ENST00000514893 PRSS16Q9NQE7 514 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 INIPQ9NRY2 104 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 MCTS1Q9ULC4 181 aaKnown RBP0.94□□□□□ -2.26
NEDD4-211ENST00000514893 ORC6Q9Y5N6 252 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 ZNF706Q9Y5V0 76 aaPredicted RBP0.94□□□□□ -2.26
NEDD4-211ENST00000514893 ZNF780BQ9Y6R6 833 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 SSH2Q76I76 1423 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 PLEKHG2Q9H7P9 1386 aa0.94□□□□□ -2.26
NEDD4-211ENST00000514893 NEURL4Q96JN8 1562 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 NPHP4O75161 1426 aaPredicted RBP0.93□□□□□ -2.26
NEDD4-211ENST00000514893 A0A0B4J2E0 115 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 CCL15-CCL14A0A0B4J2E2 113 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 A0A1B0GTQ1 180 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 FAM240AA0A1B0GVK7 77 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 SLC22A20A6NK97 555 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 H7C2Y5 167 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 J3QT63 122 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 RNF113AO15541 343 aaKnown RBP0.93□□□□□ -2.26
NEDD4-211ENST00000514893 PSIP1O75475 530 aaKnown RBP0.93□□□□□ -2.26
NEDD4-211ENST00000514893 TTC4O95801 387 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 HOXB8P17481 243 aaPredicted RBP0.93□□□□□ -2.26
NEDD4-211ENST00000514893 CXCR1P25024 350 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 PAX6P26367 422 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 CRABP2P29373 138 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 CLDN6P56747 220 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 C2orf54Q08AI8 447 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ST3GAL4Q11206 333 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ZNF235Q14590 738 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ELOCQ15369 112 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 SLC9A3R2Q15599 337 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ZNF141Q15928 474 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 CCL15Q16663 113 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ATP6V1FQ16864 119 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 NDUFAF6Q330K2 333 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 SP6Q3SY56 376 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 LGALSLQ3ZCW2 172 aaPredicted RBP0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ZNF678Q5SXM1 525 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 LDLRAD2Q5SZI1 272 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 DUPD1Q68J44 220 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ULK3Q6PHR2 472 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 C16orf47Q6ZP98 133 aaPredicted RBP0.93□□□□□ -2.26
NEDD4-211ENST00000514893 TRMT10CQ7L0Y3 403 aaKnown RBP0.93□□□□□ -2.26
NEDD4-211ENST00000514893 OR2W3Q7Z3T1 314 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 PRNTQ86SH4 94 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 APRG1Q8IVJ8 170 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 CYP4Z2PQ8N1L4 340 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ARHGAP18Q8N392 663 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ZNF664Q8N3J9 261 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 CCNYL1Q8N7R7 359 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ZDHHC22Q8N966 263 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 Q8NDZ9 215 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 OR10Z1Q8NGY1 313 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 OR51A7Q8NH64 312 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 CMTM2Q8TAZ6 248 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ACTL9Q8TC94 416 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 C2orf15Q8WU43 125 aaKnown RBP0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ORAOV1Q8WV07 137 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 TMEM234Q8WY98 164 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 OR8D1Q8WZ84 308 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 NAT6Q93015 286 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ZNF707Q96C28 371 aaPredicted RBP0.93□□□□□ -2.26
NEDD4-211ENST00000514893 RNF170Q96K19 258 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 OR2M4Q96R27 311 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 OR2V2Q96R30 315 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 API5Q9BZZ5 524 aaKnown RBP0.93□□□□□ -2.26
NEDD4-211ENST00000514893 SRRQ9GZT4 340 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 RGCCQ9H4X1 137 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 TREX1Q9NSU2 369 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 RBM22Q9NW64 420 aaKnown RBP eCLIP0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ZNF492Q9P255 531 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 HMGXB4Q9UGU5 601 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ZNF257Q9Y2Q1 563 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ACOT9Q9Y305 439 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 OR51B2Q9Y5P1 312 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ICOSQ9Y6W8 199 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 ANKRD12Q6UB98 2062 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 SCN1AP35498 2009 aa0.93□□□□□ -2.26
NEDD4-211ENST00000514893 IGHV6-1A0A0B4J1U7 121 aa0.92□□□□□ -2.26
NEDD4-211ENST00000514893 A0A0B4J2C4 111 aa0.92□□□□□ -2.26
NEDD4-211ENST00000514893 A0A1W2PRF3 423 aa0.92□□□□□ -2.26
NEDD4-211ENST00000514893 A0A1W2PRM7 423 aa0.92□□□□□ -2.26
NEDD4-211ENST00000514893 TMEM72A0PK05 275 aa0.92□□□□□ -2.26
NEDD4-211ENST00000514893 IZUMO1RA6ND01 250 aa0.92□□□□□ -2.26
NEDD4-211ENST00000514893 TVP23AA6NH52 213 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms