RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 ARL9Q6T311 187 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 PLET1Q6UQ28 207 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 ZNF429Q86V71 674 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 OR8U1Q8NH10 309 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 LRRC20Q8TCA0 184 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 ASZ1Q8WWH4 475 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 NTAN1Q96AB6 310 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 CPB2Q96IY4 423 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 FAM19A4Q96LR4 140 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 HINT2Q9BX68 163 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 POMKQ9H5K3 350 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 ARMC7Q9H6L4 198 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 REEP1Q9H902 201 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 SLC17A7Q9P2U7 560 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 SPEGQ15772 3267 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 TDRD6O60522 2096 aaKnown RBP3.43□□□□□ -1.86
RFC1-216ENST00000514572 FREM2Q5SZK8 3169 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 DOCK6Q96HP0 2047 aa3.43□□□□□ -1.86
RFC1-216ENST00000514572 ARHGAP21Q5T5U3 1957 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 KNTC1P50748 2209 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 A0A0A6YYD5 115 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 IGHV3-66A0A0C4DH42 116 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 ERICH2A1L162 156 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 FAM166BA8MTA8 275 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 ANKRD63C9JTQ0 380 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 CTNSO60931 367 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 RP2O75695 350 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 IGFBP3P17936 291 aaPredicted RBP3.42□□□□□ -1.86
RFC1-216ENST00000514572 BGNP21810 368 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 MYCNOSP40205 109 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 SLC35B1P78383 322 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 DMTNQ08495 405 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 TRDNQ13061 729 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 ART3Q13508 389 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 FBXL22Q6P050 247 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 CEMP1Q6PRD7 247 aaPredicted RBP3.42□□□□□ -1.86
RFC1-216ENST00000514572 CD300LGQ6UXG3 332 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 RBM45Q8IUH3 476 aaKnown RBP3.42□□□□□ -1.86
RFC1-216ENST00000514572 DAW1Q8N136 415 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 C15orf56Q8N910 161 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 WDR31Q8NA23 367 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 ELSPBP1Q96BH3 223 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 SAMD10Q9BYL1 202 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 RGS18Q9NS28 235 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 GINS2Q9Y248 185 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 UBIAD1Q9Y5Z9 338 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 CACNA1EQ15878 2313 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 LOC400499M0QZD8 3231 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 KALRNO60229 2985 aa3.42□□□□□ -1.86
RFC1-216ENST00000514572 PCNX2A6NKB5 2137 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 LRP4O75096 1905 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 A0A0J9YXV3 536 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 HSBP1L1C9JCN9 74 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 PRMT5O14744 637 aaPredicted RBP3.41□□□□□ -1.86
RFC1-216ENST00000514572 TRAPPC6AO75865 159 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 GLAP06280 429 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 RAB3AP20336 220 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 HTR2CP28335 458 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 KCNJ3P48549 501 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 RAB7AP51149 207 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 SYNJ2BPP57105 145 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 RPS23P62266 143 aaKnown RBP3.41□□□□□ -1.86
RFC1-216ENST00000514572 PSG3Q16557 428 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 ATP6V1FQ16864 119 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 METTL21CQ5VZV1 264 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 CDKL3Q8IVW4 592 aaPredicted RBP3.41□□□□□ -1.86
RFC1-216ENST00000514572 SNX31Q8N9S9 440 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 LRRC29Q8WV35 223 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 CENPNQ96H22 339 aaPredicted RBP3.41□□□□□ -1.86
RFC1-216ENST00000514572 RNF170Q96K19 258 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 PRRG3Q9BZD7 231 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 RPP21Q9H633 154 aaKnown RBP3.41□□□□□ -1.86
RFC1-216ENST00000514572 ZNF442Q9H7R0 627 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 SLC40A1Q9NP59 571 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 MED4Q9NPJ6 270 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 RBAKQ9NYW8 714 aaPredicted RBP3.41□□□□□ -1.86
RFC1-216ENST00000514572 ZNF229Q9UJW7 825 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 GGA2Q9UJY4 613 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 RAB23Q9ULC3 237 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 KLF12Q9Y4X4 402 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 PI4KAP42356 2102 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 AKAP13Q12802 2813 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 APC2O95996 2303 aa3.41□□□□□ -1.86
RFC1-216ENST00000514572 GOLGA4Q13439 2230 aaKnown RBP3.4□□□□□ -1.86
RFC1-216ENST00000514572 COL1A2P08123 1366 aa3.4□□□□□ -1.86
RFC1-216ENST00000514572 IGLV11-55A0A075B6I3 123 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 IGKV1-8A0A0C4DH67 115 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 A0A0D9SFI3 127 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 A0A1B0GUA9 196 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 A6NDX4 124 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 ERI2A8K979 691 aaKnown RBP3.4□□□□□ -1.87
RFC1-216ENST00000514572 E7EWF7 191 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 INS-IGF2F8WCM5 200 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 RDH16O75452 317 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 GCGP01275 180 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 THRAP10827 490 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 CD9P21926 228 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 LOXP28300 417 aaPredicted RBP3.4□□□□□ -1.87
RFC1-216ENST00000514572 HCAR3P49019 387 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 P2RX1P51575 399 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms