RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 RGP1Q92546 391 aaPredicted RBP11.63□□□□□ -0.55
USP46-209ENST00000514536 BORCS8Q96FH0 119 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 ZNF488Q96MN9 340 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 CCL13Q99616 98 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 RASSF4Q9H2L5 321 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 DUSP21Q9H596 190 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 MMP26Q9NRE1 261 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 CTSZQ9UBR2 303 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 LRCH1Q9Y2L9 728 aa11.63□□□□□ -0.55
USP46-209ENST00000514536 SONP18583 2426 aaKnown RBP11.63□□□□□ -0.55
USP46-209ENST00000514536 PNMA8CA0A1B0GUJ8 204 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 TRAPPC2LH3BP13 241 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 OCM2P0CE71 109 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 OCMP0CE72 109 aaPredicted RBP11.62□□□□□ -0.55
USP46-209ENST00000514536 PCMT1P22061 227 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 PRKACBP22694 351 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 ATP1B3P54709 279 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 DOC2BQ14184 412 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 DCAF12L2Q5VW00 463 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 RNLSQ5VYX0 342 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 ZNF841Q6ZN19 808 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 SERPINA12Q8IW75 414 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 BATF2Q8N1L9 274 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 OR13C9Q8NGT0 318 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 GPR148Q8TDV2 347 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 GHSRQ92847 366 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 TMIGD2Q96BF3 282 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 SMIM19Q96E16 107 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 ZNF184Q99676 751 aaPredicted RBP11.62□□□□□ -0.55
USP46-209ENST00000514536 CDCA4Q9BXL8 241 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 ZCCHC4Q9H5U6 513 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 CLN8Q9UBY8 286 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 CDC42EP3Q9UKI2 254 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 ZNF281Q9Y2X9 895 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.62□□□□□ -0.553e-6■■■■□ 23.4
USP46-209ENST00000514536 A0A0G2JMP0 313 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 A0A0X1KG70 313 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 A8MXK9 166 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 RRP9O43818 475 aaKnown RBP11.62□□□□□ -0.55
USP46-209ENST00000514536 INMTO95050 263 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 PLATP00750 562 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 TFF1P04155 84 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 CRHBPP24387 322 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 MPZP25189 248 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 AZGP1P25311 298 aaKnown RBP11.62□□□□□ -0.55
USP46-209ENST00000514536 RBP2P50120 134 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 MTCP1P56278 107 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 WDR25Q64LD2 544 aaPredicted RBP11.62□□□□□ -0.55
USP46-209ENST00000514536 PARP16Q8N5Y8 322 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 POC1AQ8NBT0 407 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 DNAAF1Q8NEP3 725 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 OR4M2Q8NGB6 313 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 OR5D14Q8NGL3 314 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 C12orf43Q96C57 262 aaKnown RBP11.62□□□□□ -0.55
USP46-209ENST00000514536 MND1Q9BWT6 205 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 PKIBQ9C010 78 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 NLKQ9UBE8 527 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 LPAR3Q9UBY5 353 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 OR5V1Q9UGF6 321 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 POLDIP2Q9Y2S7 368 aa11.62□□□□□ -0.55
USP46-209ENST00000514536 POLR3KQ9Y2Y1 108 aaPredicted RBP11.62□□□□□ -0.55
USP46-209ENST00000514536 A0A1B0GW55 424 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 TMPRSS2O15393 492 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 RGS10O43665 173 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 DUX4L2P0CJ85 424 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 DUX4L3P0CJ86 424 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 DUX4L4P0CJ87 422 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 DUX4L5P0CJ88 424 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 DUX4L6P0CJ89 424 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 DUX4L7P0CJ90 424 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 PGA5P0DJD9 388 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 AMY2BP19961 511 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 HNF1AP20823 631 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 GABRA2P47869 451 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 TAS2R43P59537 309 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 IL24Q13007 206 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 IRF3Q14653 427 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 RBM48Q5RL73 367 aaKnown RBP11.61□□□□□ -0.55
USP46-209ENST00000514536 STUMQ69YW2 141 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 DUX4L9Q6RFH8 374 aaPredicted RBP11.61□□□□□ -0.55
USP46-209ENST00000514536 ACP7Q6ZNF0 438 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 SLC25A26Q70HW3 274 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 OR13C5Q8NGS8 318 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 SPSB1Q96BD6 273 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 OPALINQ96PE5 141 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 SPACA5Q96QH8 159 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 CCDC90BQ9GZT6 254 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 Q9H521 79 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 RASL12Q9NYN1 266 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 KAAG1Q9UBP8 84 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 DUX4Q9UBX2 424 aa11.61□□□□□ -0.55
USP46-209ENST00000514536 DNHD1Q96M86 4753 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 PPIAL4CA0A0B4J2A2 164 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 OR2AT4A6NND4 320 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 DVL1O14640 695 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 DENRO43583 198 aaKnown RBP11.6□□□□□ -0.55
USP46-209ENST00000514536 NOS1APO75052 506 aaPredicted RBP11.6□□□□□ -0.55
USP46-209ENST00000514536 NXPH2O95156 264 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 AVPP01185 164 aa11.6□□□□□ -0.55
USP46-209ENST00000514536 MT-ND2P03891 347 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms