RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 PSMB6P28072 239 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 INPP1P49441 399 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 CCR4P51679 360 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF283Q8N7M2 679 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF441Q8N8Z8 693 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 OR4D6Q8NGJ1 314 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 NANPQ8TBE9 248 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 PTPMT1Q8WUK0 201 aaPredicted RBP6.47□□□□□ -1.37
CLIP1-205ENST00000514271 RASD2Q96D21 266 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 RTN4RQ9BZR6 473 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 WFDC1Q9HC57 220 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 PNRC2Q9NPJ4 139 aaKnown RBP6.47□□□□□ -1.37
CLIP1-205ENST00000514271 PNO1Q9NRX1 252 aaKnown RBP6.47□□□□□ -1.37
CLIP1-205ENST00000514271 MIOXQ9UGB7 285 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 PTPRZ1P23471 2315 aaPredicted RBP6.47□□□□□ -1.37
CLIP1-205ENST00000514271 FXYD6-FXYD2A0A087WZ82 144 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 A0A0U1RQV5 110 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 CLEC18AA5D8T8 446 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 OR5H15A6NDH6 313 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 TMEM210A6NLX4 147 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 K7N7A8 449 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 CBR1P16152 277 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 CDX1P47902 265 aaPredicted RBP6.46□□□□□ -1.37
CLIP1-205ENST00000514271 PRPS1P60891 318 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 RPS23P62266 143 aaKnown RBP6.46□□□□□ -1.37
CLIP1-205ENST00000514271 LSM6P62312 80 aaKnown RBP6.46□□□□□ -1.37
CLIP1-205ENST00000514271 PDZK1IP1Q13113 114 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 Q6ZS92 163 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 SLC16A13Q7RTY0 426 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF295-AS1Q8N0V1 137 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 CLEC18CQ8NCF0 446 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 OR10S1Q8NGN2 331 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 WFDC12Q8WWY7 111 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 ASB17Q8WXJ9 295 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 TSLPQ969D9 159 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 OR10C1Q96KK4 312 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 G6PC3Q9BUM1 346 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 FXYD6Q9H0Q3 95 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 TMEM160Q9NX00 188 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 IER3IP1Q9Y5U9 82 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 KNL1Q8NG31 2342 aa6.46□□□□□ -1.37
CLIP1-205ENST00000514271 EML6Q6ZMW3 1958 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 TVP23AA6NH52 213 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 RAD51DO75771 328 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 SFT2D2O95562 160 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 RAB5AP20339 215 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 FAUP35544 74 aaKnown RBP6.46□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF133P52736 654 aaPredicted RBP6.46□□□□□ -1.38
CLIP1-205ENST00000514271 SLC37A1P57057 533 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 RPS18P62269 152 aaKnown RBP6.46□□□□□ -1.38
CLIP1-205ENST00000514271 MEF2DQ14814 521 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 RHEBQ15382 184 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 SLC22A6Q4U2R8 563 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 ADGRE4PQ86SQ3 457 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF679Q8IYX0 411 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.46□□□□□ -1.38
CLIP1-205ENST00000514271 OR51D1Q8NGF3 324 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 OR6X1Q8NH79 312 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 OR5R1Q8NH85 324 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 MACROD1Q9BQ69 325 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 TCEAL7Q9BRU2 100 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 TEX12Q9BXU0 123 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 OR10A5Q9H207 317 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF552Q9H707 407 aaPredicted RBP6.46□□□□□ -1.38
CLIP1-205ENST00000514271 GNG8Q9UK08 70 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 MRPS18CQ9Y3D5 142 aaKnown RBP6.46□□□□□ -1.38
CLIP1-205ENST00000514271 TRBV11-1A0A0K0K1C0 115 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 WRBO00258 174 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 KCNAB3O43448 404 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 DEDDO75618 318 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 IFNA2P01563 188 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 CDKN1BP46527 198 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF121P58317 390 aaPredicted RBP6.46□□□□□ -1.38
CLIP1-205ENST00000514271 BTG2P78543 158 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 HIST3H3Q16695 136 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 RNASE12Q5GAN4 147 aaKnown RBP6.46□□□□□ -1.38
CLIP1-205ENST00000514271 OR2B11Q5JQS5 317 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 RNF144BQ7Z419 303 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 OR4K17Q8NGC6 315 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 TNFRSF14Q92956 283 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 WWTR1Q9GZV5 400 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 AKIRIN1Q9H9L7 192 aaPredicted RBP6.46□□□□□ -1.38
CLIP1-205ENST00000514271 ZC4H2Q9NQZ6 224 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 TMEM242Q9NWH2 141 aa6.46□□□□□ -1.38
CLIP1-205ENST00000514271 KLRC4-KLRK1H3BQV0 150 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 TAAR5O14804 337 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 OIP5O43482 229 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 PF4P02776 101 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 RNF224P0DH78 156 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 WT1P19544 449 aaPredicted RBP6.45□□□□□ -1.38
CLIP1-205ENST00000514271 MAOAP21397 527 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 APOBEC1P41238 236 aaKnown RBP6.45□□□□□ -1.38
CLIP1-205ENST00000514271 TMEM50BP56557 158 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 EBPQ15125 230 aaKnown RBP6.45□□□□□ -1.38
CLIP1-205ENST00000514271 HMGN3Q15651 99 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 HYAL4Q2M3T9 481 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 HIST3H2BBQ8N257 126 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 CCDC107Q8WV48 283 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 ROBO4Q8WZ75 1007 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 KTI12Q96EK9 354 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms