RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 ZNF732B4DXR9 585 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 SULT1C2O00338 296 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 PFDN1O60925 122 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 IGLV1-44P01699 117 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 HLA-DQB1P01920 261 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 CSF1P09603 554 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 CD3GP09693 182 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 CD37P11049 281 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 GTF2F2P13984 249 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 MGMTP16455 207 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 CHRNB4P30926 498 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 RCVRNP35243 200 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 GDNFP39905 211 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 VEGFCP49767 419 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 GPM6AP51674 278 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 EFNB2P52799 333 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 GNG2P59768 71 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 DGCR2P98153 550 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 NAAAQ02083 359 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 SSBP1Q04837 148 aaKnown RBP6.94□□□□□ -1.3
HTT-209ENST00000512068 FAM27E3Q08E93 113 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 SNTB2Q13425 540 aaKnown RBP6.94□□□□□ -1.3
HTT-209ENST00000512068 OXA1LQ15070 435 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 OR8G1Q15617 311 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 CEACAM21Q3KPI0 293 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 DMRTC1Q5HYR2 192 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 OR10K2Q6IF99 312 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 MTFR2Q6P444 385 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 PLET1Q6UQ28 207 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 TMEM108Q6UXF1 575 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 ZNF573Q86YE8 665 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 MKXQ8IYA7 352 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 ZSCAN4Q8NAM6 433 aaPredicted RBP6.94□□□□□ -1.3
HTT-209ENST00000512068 OR5A2Q8NGI9 324 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 OR10R2Q8NGX6 335 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 MISP3Q96FF7 219 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 RNF170Q96K19 258 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 NUDT16L1Q9BRJ7 211 aaKnown RBP6.94□□□□□ -1.3
HTT-209ENST00000512068 ADAT1Q9BUB4 502 aaKnown RBP6.94□□□□□ -1.3
HTT-209ENST00000512068 SELENOIQ9C0D9 397 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 POFUT1Q9H488 388 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 BANF2Q9H503 90 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 AUNIPQ9H7T9 357 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 SCPEP1Q9HB40 452 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 TBC1D24Q9ULP9 559 aa6.94□□□□□ -1.3
HTT-209ENST00000512068 RP1L1Q8IWN7 2480 aaPredicted RBP6.94□□□□□ -1.3
HTT-209ENST00000512068 FAM90A27PA6NNH2 459 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 VSTM5A8MXK1 200 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 IQCF6A8MYZ5 107 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 TRAPPC2LH3BP13 241 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 H3BUI4 141 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 LDLRAD4O15165 306 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 SPRY1O43609 319 aaPredicted RBP6.93□□□□□ -1.3
HTT-209ENST00000512068 LPLP06858 475 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 ZNF35P13682 527 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 CA6P23280 308 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 GABRR1P24046 479 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 ALDH3B1P43353 468 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 HAAOP46952 286 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 PTH2RP49190 550 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 RPS27AP62979 156 aaKnown RBP6.93□□□□□ -1.3
HTT-209ENST00000512068 GNG3P63215 75 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 PLA2G7Q13093 441 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 PDZK1IP1Q13113 114 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 TNK1Q13470 666 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 ARFRP1Q13795 201 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 PCGF3Q3KNV8 242 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 RSBN1Q5VWQ0 802 aaPredicted RBP6.93□□□□□ -1.3
HTT-209ENST00000512068 FIP1L1Q6UN15 594 aaKnown RBP6.93□□□□□ -1.3
HTT-209ENST00000512068 CCBE1Q6UXH8 406 aaPredicted RBP6.93□□□□□ -1.3
HTT-209ENST00000512068 Q6ZNX1 250 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 Q6ZTK2 550 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 NCCRP1Q6ZVX7 275 aaPredicted RBP6.93□□□□□ -1.3
HTT-209ENST00000512068 SLC25A26Q70HW3 274 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 MYPOPQ86VE0 399 aaPredicted RBP6.93□□□□□ -1.3
HTT-209ENST00000512068 LYPD6Q86Y78 171 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 OSR2Q8N2R0 312 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 ZNF611Q8N823 705 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 SPERTQ8NA61 448 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 RELL2Q8NC24 303 aaPredicted RBP6.93□□□□□ -1.3
HTT-209ENST00000512068 PXT1Q8NFP0 134 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 OR10K1Q8NGX5 313 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 OR51F2Q8NH61 342 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 OR52I2Q8NH67 350 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 KLF14Q8TD94 323 aaPredicted RBP6.93□□□□□ -1.3
HTT-209ENST00000512068 SSC4DQ8WTU2 575 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 DEDD2Q8WXF8 326 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 YIPF5Q969M3 257 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 RAB3CQ96E17 227 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 MRPS24Q96EL2 167 aaKnown RBP6.93□□□□□ -1.3
HTT-209ENST00000512068 WBP1Q96G27 269 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 ZC3HAV1LQ96H79 300 aaKnown RBP6.93□□□□□ -1.3
HTT-209ENST00000512068 NEDD4LQ96PU5 975 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 DMRTA2Q96SC8 542 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 C11orf54Q9H0W9 315 aaPredicted RBP6.93□□□□□ -1.3
HTT-209ENST00000512068 DPAGT1Q9H3H5 408 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 TMEM100Q9NV29 134 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 RBFOX1Q9NWB1 397 aaKnown RBP6.93□□□□□ -1.3
HTT-209ENST00000512068 MCUBQ9NWR8 336 aa6.93□□□□□ -1.3
HTT-209ENST00000512068 POU2F3Q9UKI9 436 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms