RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 LRRK1Q38SD2 2015 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 RPS10-NUDT3A0A1W2PQS6 291 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 PPP5D1E7EU14 171 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF195O14628 629 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 GIPP09681 153 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 ATP5A1P25705 553 aaKnown RBP4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 DDTP30046 118 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 KIR2DS4P43632 304 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 LGALS7P47929 136 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 PAFAH1B2P68402 229 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 KIR3DS1Q14943 382 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 RSPO4Q2I0M5 234 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 MS4A18Q3C1V0 323 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF585BQ52M93 769 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 SYT14P1Q58G82 188 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 METRNLQ641Q3 311 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 Q71RC1 249 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF534Q76KX8 674 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 ISCA2Q86U28 154 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 MS4A15Q8N5U1 240 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 GCSAMQ8N6F7 178 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 DEFB124Q8NES8 71 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 DYRK2Q92630 601 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 GHSRQ92847 366 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 FKBP10Q96AY3 582 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 LINC00052Q96N35 136 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 LYSMD1Q96S90 227 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 CSF3RQ99062 836 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 MS4A8Q9BY19 250 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 TBL1XR1Q9BZK7 514 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF665Q9H7R5 613 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 FGF20Q9NP95 211 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 ENY2Q9NPA8 101 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 PILRAQ9UKJ1 303 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 ING4Q9UNL4 249 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 ASCC3Q8N3C0 2202 aaKnown RBP4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZZEF1O43149 2961 aa4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 SPAARA0A1B0GVQ0 90 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 LILRA5A6NI73 299 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 TMEM200CA6NKL6 621 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 C17orf105B2RV13 164 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 GAPDHSO14556 408 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 TP53I11O14683 189 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 TYROBPO43914 113 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR1I1O60431 355 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 EML2O95834 649 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 IFNA7P01567 189 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 RLN2P04090 185 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 C4BPBP20851 252 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 S100A11P31949 105 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 DUTP33316 252 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 PTGER1P34995 402 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF140P52738 457 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 CLDN15P56746 228 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 CLDN6P56747 220 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 KLRB1Q12918 225 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 MYBPHQ13203 477 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 ABRAXAS2Q15018 415 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 MICAQ29983 383 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 LRRC75BQ2VPJ9 315 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 GPRC6AQ5T6X5 926 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 FAM78BQ5VT40 261 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 DMKNQ6E0U4 476 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 FAM71E1Q6IPT2 247 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 TEX261Q6UWH6 196 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 NIT1Q86X76 327 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 PIANPQ8IYJ0 282 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 ABHD12Q8N2K0 398 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC25A45Q8N413 288 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 DHRSXQ8N5I4 330 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF548Q8NEK5 533 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR13J1Q8NGT2 312 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 CNIH3Q8TBE1 160 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 TMEM170AQ8WVE7 144 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 PATE1Q8WXA2 126 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 TFAP2CQ92754 450 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 SEH1LQ96EE3 360 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 ATXN7L3BQ96GX2 97 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 GRAMD2BQ96HH9 432 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 ADTRPQ96IZ2 230 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 LRRC61Q9BV99 259 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 SEBOXQ9HB31 216 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZBTB20Q9HC78 741 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 RCL1Q9Y2P8 373 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 U3KQ87 197 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 TMEM131Q92545 1883 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 PLXND1Q9Y4D7 1925 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 DMXL2Q8TDJ6 3036 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 TRAV24A0A0B4J272 114 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC22A23A1A5C7 686 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 IGSF23A1L1A6 192 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 CXorf65A6NEN9 183 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 PRORSD1PA6NEY8 169 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 CLDN24A6NM45 220 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 RGS14O43566 566 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 STK17BO94768 372 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 IL18BPO95998 194 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 CRYAAP02489 173 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 THY1P04216 161 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms