RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ZNF454Q8N9F8 522 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 TEX47Q8TBZ9 253 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 MRAPQ8TCY5 172 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 PHF21AQ96BD5 680 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 CLPTM1LQ96KA5 538 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 OR5M11Q96RB7 305 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 PBOV1Q9GZY1 135 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 FAM234AQ9H0X4 552 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 NIPAL2Q9H841 368 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 ABCB9Q9NP78 766 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 TCF19Q9Y242 345 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 A0A1B0GTI1 187 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 H3BN98 237 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 TTRP02766 147 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 T-ENOLP0DO92 83 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 PIPP12273 146 aaPredicted RBP12.81□□□□□ -0.36
RAB40C-202ENST00000509637 CAPZA1P52907 286 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 LOXL3P58215 753 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 ERVK11-1P61568 191 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 SPATS1Q496A3 300 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 TCTEX1D4Q5JR98 221 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 FOXB2Q5VYV0 432 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 TMEM42Q69YG0 159 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 C16orf89Q6UX73 402 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 BCDIN3DQ7Z5W3 292 aaKnown RBP12.81□□□□□ -0.36
RAB40C-202ENST00000509637 CALHM1Q8IU99 346 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 ZNF671Q8TAW3 534 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 NPFFR1Q9GZQ6 430 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 HEXA-AS1Q9H8Q6 139 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 HES4Q9HCC6 221 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 GPR173Q9NS66 373 aa12.81□□□□□ -0.36
RAB40C-202ENST00000509637 KMT2CQ8NEZ4 4911 aaKnown RBP12.81□□□□□ -0.36
RAB40C-202ENST00000509637 TMEM269A0A1B0GVZ9 245 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 PQLC2LA1A4F0 135 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 B2RBV5 119 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 NOS1APO75052 506 aaPredicted RBP12.8□□□□□ -0.36
RAB40C-202ENST00000509637 FBXO24O75426 580 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 MRPL3P09001 348 aaKnown RBP12.8□□□□□ -0.36
RAB40C-202ENST00000509637 APOFQ13790 326 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 TRIM25Q14258 630 aaKnown RBP12.8□□□□□ -0.36
RAB40C-202ENST00000509637 SNCBQ16143 134 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 PLCXD3Q63HM9 321 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 C11orf88Q6PI97 169 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 KRT77Q7Z794 578 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 DHFR2Q86XF0 187 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 ANGPTL5Q86XS5 388 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 FTMTQ8N4E7 242 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 R3HDM4Q96D70 268 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 HIST1H2AAQ96QV6 131 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 NRIP2Q9BQI9 281 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 OCSTAMPQ9BR26 566 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 CHID1Q9BWS9 393 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 MED4Q9NPJ6 270 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 PIGLQ9Y2B2 252 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 DNAH9Q9NYC9 4486 aa12.8□□□□□ -0.36
RAB40C-202ENST00000509637 NBEAL2Q6ZNJ1 2754 aa12.79□□□□□ -0.36
RAB40C-202ENST00000509637 OR5B21A6NL26 309 aa12.79□□□□□ -0.36
RAB40C-202ENST00000509637 PRODHO43272 600 aa12.79□□□□□ -0.36
RAB40C-202ENST00000509637 ZNF737O75373 536 aa12.79□□□□□ -0.36
RAB40C-202ENST00000509637 TK1P04183 234 aa12.79□□□□□ -0.36
RAB40C-202ENST00000509637 PLEKHG7Q6ZR37 379 aa12.79□□□□□ -0.36
RAB40C-202ENST00000509637 ZNF561Q8N587 486 aa12.79□□□□□ -0.36
RAB40C-202ENST00000509637 OR14K1Q8NGZ2 314 aa12.79□□□□□ -0.36
RAB40C-202ENST00000509637 FAM81AQ8TBF8 368 aa12.79□□□□□ -0.36
RAB40C-202ENST00000509637 APOL4Q9BPW4 351 aa12.79□□□□□ -0.36
RAB40C-202ENST00000509637 RASL12Q9NYN1 266 aa12.79□□□□□ -0.36
RAB40C-202ENST00000509637 IGKV1-27A0A075B6S5 117 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 TMEM82A0PJX8 343 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 ARRDC5A6NEK1 342 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 J3QT63 122 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 K7EIL1 84 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 M0R129 80 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 MMP23AO75900 390 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 NRASP01111 189 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 OSMP13725 252 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 IGLL1P15814 213 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 HAAOP46952 286 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 ROM1Q03395 351 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 RIPPLY1Q0D2K3 151 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 CNN3Q15417 329 aaKnown RBP12.78□□□□□ -0.36
RAB40C-202ENST00000509637 SSX2Q16385 188 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 HSP90B2PQ58FF3 399 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 ZNF626Q68DY1 528 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 C10orf99Q6UWK7 81 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 BAIAP2L2Q6UXY1 529 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 Q6ZSR3 168 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 REC114Q7Z4M0 266 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 CPLX4Q7Z7G2 160 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 NDUFA11Q86Y39 141 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 PAPD5Q8NDF8 572 aaKnown RBP12.78□□□□□ -0.36
RAB40C-202ENST00000509637 WFDC9Q8NEX5 89 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 CANT1Q8WVQ1 401 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 YIPF3Q9GZM5 350 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 NECAP2Q9NVZ3 263 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 USE1Q9NZ43 259 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 OR14J1Q9UGF5 321 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 NUFIP1Q9UHK0 495 aaKnown RBP12.78□□□□□ -0.36
RAB40C-202ENST00000509637 LAMP5Q9UJQ1 280 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 ARL2BPQ9Y2Y0 163 aa12.78□□□□□ -0.36
RAB40C-202ENST00000509637 V9GYS6 101 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms