RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 B4GALT1P15291 398 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 ELK1P19419 428 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 GIFP27352 417 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 BTCP35070 178 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 OR1E2P47887 323 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 GIPRP48546 466 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 DAP3P51398 398 aaKnown RBP6.89□□□□□ -1.31
SCN1A-207ENST00000507401 SCAND1P57086 179 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 CDK5Q00535 292 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 FABP5Q01469 135 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 RPL18Q07020 188 aaKnown RBP6.89□□□□□ -1.31
SCN1A-207ENST00000507401 ZNF345Q14585 488 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 HLXQ14774 488 aaPredicted RBP6.89□□□□□ -1.31
SCN1A-207ENST00000507401 FAM209BQ5JX69 171 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 AVPI1Q5T686 147 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 CYB5R2Q6BCY4 276 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 CDPF1Q6NVV7 123 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 VHLLQ6RSH7 139 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 GLDNQ6ZMI3 551 aaPredicted RBP6.89□□□□□ -1.31
SCN1A-207ENST00000507401 FAM122BQ7Z309 247 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 MYPOPQ86VE0 399 aaPredicted RBP6.89□□□□□ -1.31
SCN1A-207ENST00000507401 WDFY1Q8IWB7 410 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 TCEANCQ8N8B7 351 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 ZNF485Q8NCK3 441 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 HAVCR2Q8TDQ0 301 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 GLYATL2Q8WU03 294 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 MRPL24Q96A35 216 aaKnown RBP6.89□□□□□ -1.31
SCN1A-207ENST00000507401 ZNF582Q96NG8 517 aaPredicted RBP6.89□□□□□ -1.31
SCN1A-207ENST00000507401 PIMREGQ9BSJ6 248 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 C20orf85Q9H1P6 137 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 MS4A5Q9H3V2 200 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 C1orf198Q9H425 327 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 ZCCHC4Q9H5U6 513 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 METTL17Q9H7H0 456 aaPredicted RBP6.89□□□□□ -1.31
SCN1A-207ENST00000507401 NOX3Q9HBY0 568 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 TRIM36Q9NQ86 728 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 YAE1D1Q9NRH1 226 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 TMEM38BQ9NVV0 291 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 TAS2R8Q9NYW2 309 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 MYEF2Q9P2K5 600 aaKnown RBP6.89□□□□□ -1.31
SCN1A-207ENST00000507401 CLEC2DQ9UHP7 191 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 CHD3Q12873 2000 aaKnown RBP6.89□□□□□ -1.31
SCN1A-207ENST00000507401 SONP18583 2426 aaKnown RBP6.88□□□□□ -1.31
SCN1A-207ENST00000507401 ANK3Q12955 4377 aaKnown RBP6.88□□□□□ -1.31
SCN1A-207ENST00000507401 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 TMEM218A2RU14 115 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 GABARAPH6UMI1 98 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 ZNF593O00488 134 aaPredicted RBP6.88□□□□□ -1.31
SCN1A-207ENST00000507401 SYNGR3O43761 229 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 OR10H3O60404 316 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 ARL6IP5O75915 188 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 LY6HO94772 140 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 OR2F2O95006 317 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 CFDP00746 253 aaPredicted RBP6.88□□□□□ -1.31
SCN1A-207ENST00000507401 GASTP01350 101 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 IFNA2P01563 188 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 CLEC2LP0C7M8 214 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 PMELP40967 661 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 AQP2P41181 271 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 GDI2P50395 445 aaKnown RBP6.88□□□□□ -1.31
SCN1A-207ENST00000507401 ZNF84P51523 738 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 CLRN1P58418 232 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 RPS23P62266 143 aaKnown RBP6.88□□□□□ -1.31
SCN1A-207ENST00000507401 RPS25P62851 125 aaKnown RBP6.88□□□□□ -1.31
SCN1A-207ENST00000507401 SSBP1Q04837 148 aaKnown RBP6.88□□□□□ -1.31
SCN1A-207ENST00000507401 OR2F1Q13607 317 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 KLF9Q13886 244 aaPredicted RBP6.88□□□□□ -1.31
SCN1A-207ENST00000507401 TRAM2Q15035 370 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 HMGN3Q15651 99 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 SLC36A2Q495M3 483 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 C10orf91Q5T1B1 145 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 C10orf128Q5T292 105 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 IDNKQ5T6J7 187 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 OLFML2AQ68BL7 652 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 MOB3CQ70IA8 216 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 TMUB2Q71RG4 321 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 RHOUQ7L0Q8 258 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 TSEN54Q7Z6J9 526 aaKnown RBP6.88□□□□□ -1.31
SCN1A-207ENST00000507401 ZNF584Q8IVC4 421 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 CDK20Q8IZL9 346 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 OR9Q2Q8NGE9 314 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 OR1J2Q8NGS2 313 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 OR1S1Q8NH92 325 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 TMEM255BQ8WV15 326 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 SFT2D1Q8WV19 159 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 ASB10Q8WXI3 467 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 MCHR2Q969V1 340 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 BPIFA2Q96DR5 249 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 MRPS24Q96EL2 167 aaKnown RBP6.88□□□□□ -1.31
SCN1A-207ENST00000507401 PRRC1Q96M27 445 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 FOXN4Q96NZ1 517 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 TXNIPQ9H3M7 391 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 OPA3Q9H6K4 179 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 TCF7L1Q9HCS4 588 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 KRCC1Q9NPI7 259 aaPredicted RBP6.88□□□□□ -1.31
SCN1A-207ENST00000507401 ZFP57Q9NU63 452 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 C20orf141Q9NUB4 165 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 RASL12Q9NYN1 266 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 DNAJC27Q9NZQ0 273 aa6.88□□□□□ -1.31
SCN1A-207ENST00000507401 MGAT4CQ9UBM8 478 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms