RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 CES1P1Q9UKY3 287 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 OR51B2Q9Y5P1 312 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 BZW2Q9Y6E2 419 aaKnown RBP1.2□□□□□ -2.22
GYPB-207ENST00000506679 JCADQ9P266 1359 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 ZBED9Q6R2W3 1325 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 TMEM72A0PK05 275 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 ISPDA4D126 451 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 H7C2Y5 167 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 MYL12BO14950 172 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 KDELR3O43731 214 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 KLHL2O95198 593 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 PLEKHA8P1O95397 391 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 TTC4O95801 387 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 CSTAP01040 98 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 S100A9P06702 114 aaKnown RBP1.19□□□□□ -2.22
GYPB-207ENST00000506679 IVLP07476 585 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 CCDC172P0C7W6 258 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 ARR3P36575 388 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 CFHR2P36980 270 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 CARD18P57730 90 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 SLC35B1P78383 322 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 MEF2CQ06413 473 aaPredicted RBP1.19□□□□□ -2.22
GYPB-207ENST00000506679 INCA1Q0VD86 236 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 ST3GAL4Q11206 333 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 TRDNQ13061 729 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 TSC22D1Q15714 1073 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 VAMP3Q15836 100 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 ATP6V1FQ16864 119 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 LINC00303Q3SY05 128 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 THOC7Q6I9Y2 204 aaKnown RBP1.19□□□□□ -2.22
GYPB-207ENST00000506679 SMARCD3Q6STE5 483 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 FAM131AQ6UXB0 335 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 SLC30A8Q8IWU4 369 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 DAW1Q8N136 415 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 OR2M7Q8NG81 312 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 OR1S1Q8NH92 325 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 ZFAND1Q8TCF1 268 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 SFXN5Q8TD22 340 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 TCP10LQ8TDR4 215 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 RXFP2Q8WXD0 754 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 TOP1MTQ969P6 601 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 KIAA1143Q96AT1 154 aaPredicted RBP1.19□□□□□ -2.22
GYPB-207ENST00000506679 ZNF707Q96C28 371 aaPredicted RBP1.19□□□□□ -2.22
GYPB-207ENST00000506679 SNF8Q96H20 258 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 ALS2CR12Q96Q35 445 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 ZNF649Q9BS31 505 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 TM6SF2Q9BZW4 377 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 NAA50Q9GZZ1 169 aaKnown RBP1.19□□□□□ -2.22
GYPB-207ENST00000506679 OR2AG1Q9H205 316 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 OR51B5Q9H339 312 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 WDR55Q9H6Y2 383 aaPredicted RBP1.19□□□□□ -2.22
GYPB-207ENST00000506679 C6orf50Q9HD87 102 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 FBXO8Q9NRD0 319 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 CFL2Q9Y281 166 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 MYO16Q9Y6X6 1858 aa1.19□□□□□ -2.22
GYPB-207ENST00000506679 ZNF608Q9ULD9 1512 aaPredicted RBP1.19□□□□□ -2.22
GYPB-207ENST00000506679 NACADO15069 1562 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 NPHP4O75161 1426 aaPredicted RBP1.18□□□□□ -2.22
GYPB-207ENST00000506679 LOC102724200A0A096LPH7 203 aaPredicted RBP1.18□□□□□ -2.22
GYPB-207ENST00000506679 IZUMO1RA6ND01 250 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 FAM25EA8MYX2 175 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 NDUFS8O00217 210 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 DFFAO00273 331 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 TRAPPC6AO75865 159 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 SMC2O95347 1197 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 GCGP01275 180 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 RHOCP08134 193 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 SLC35G6P0C7Q6 338 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 PTNP21246 168 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 HLA-DMAP28067 261 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 HCCSP53701 268 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 TNFRSF9Q07011 255 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 DEFB134Q4QY38 66 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 CPTPQ5TA50 214 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 C16orf87Q6PH81 154 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 USP50Q70EL3 339 aaPredicted RBP1.18□□□□□ -2.22
GYPB-207ENST00000506679 SLC7A5P1Q8MH63 180 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 ASCC1Q8N9N2 400 aaKnown RBP1.18□□□□□ -2.22
GYPB-207ENST00000506679 WDR31Q8NA23 367 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 BAALCQ8WXS3 180 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 TMEM234Q8WY98 164 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 OR8D1Q8WZ84 308 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 LRRC39Q96DD0 335 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 C19orf60Q96EN9 201 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 MRPL48Q96GC5 212 aaKnown RBP1.18□□□□□ -2.22
GYPB-207ENST00000506679 MSANTD3Q96H12 275 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 CENPNQ96H22 339 aaPredicted RBP1.18□□□□□ -2.22
GYPB-207ENST00000506679 RNF170Q96K19 258 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 TSNAXQ99598 290 aaKnown RBP1.18□□□□□ -2.22
GYPB-207ENST00000506679 XKR8Q9H6D3 395 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 SND1-IT1Q9HBX3 110 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 VCX3AQ9NNX9 186 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 VAX2Q9UIW0 290 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 SLC7A11Q9UPY5 501 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 KPTNQ9Y664 436 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 DYSFO75923 2080 aa1.18□□□□□ -2.22
GYPB-207ENST00000506679 NUP205Q92621 2012 aa1.17□□□□□ -2.22
GYPB-207ENST00000506679 TRAV8-4A0A0B4J246 113 aa1.17□□□□□ -2.22
GYPB-207ENST00000506679 IGHV2OR16-5A0A0B4J2B6 119 aa1.17□□□□□ -2.22
GYPB-207ENST00000506679 LOC100653049A0A140TA62 436 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms