RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TMEM176BQ3YBM2 270 aaPredicted RBP13.99□□□□□ -0.17
SCLT1-208ENST00000506368 DPPA2Q7Z7J5 298 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 YAF2Q8IY57 180 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 TMEM104Q8NE00 496 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 OR5L2Q8NGL0 311 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 SLC25A36Q96CQ1 311 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 MISP3Q96FF7 219 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 FAM210BQ96KR6 192 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 SLC25A31Q9H0C2 315 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 WFDC1Q9HC57 220 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 SPTBP11277 2137 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 CDRT15L2A8MXV6 281 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 IL2RGP31785 369 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 DHPSP49366 369 aaPredicted RBP13.98□□□□□ -0.17
SCLT1-208ENST00000506368 ERVFRD-1P60508 538 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 RNF4P78317 190 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 ZNF776Q68DI1 518 aaPredicted RBP13.98□□□□□ -0.17
SCLT1-208ENST00000506368 SEMA6DQ8NFY4 1073 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 OR14K1Q8NGZ2 314 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 MRPL24Q96A35 216 aaKnown RBP13.98□□□□□ -0.17
SCLT1-208ENST00000506368 SLAMF6Q96DU3 332 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 ST6GALNAC5Q9BVH7 336 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 METTL9Q9H1A3 318 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 CENPMQ9NSP4 180 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 OBP2AQ9NY56 170 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 SLCO1B1Q9Y6L6 691 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 ATG2BQ96BY7 2078 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 TTC28Q96AY4 2481 aa13.98□□□□□ -0.17
SCLT1-208ENST00000506368 TRBV24-1A0A075B6N3 115 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 CRTAPO75718 401 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-208ENST00000506368 NSA2O95478 260 aaKnown RBP13.97□□□□□ -0.17
SCLT1-208ENST00000506368 SCGB1D2O95969 90 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 CLPSP04118 112 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 SFTPDP35247 375 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 GABRA4P48169 554 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 FHITP49789 147 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 DCAF7P61962 342 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 GNMTQ14749 295 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 NFATC4Q14934 902 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 TMEM182Q6ZP80 229 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-208ENST00000506368 TMEM183AQ8IXX5 376 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 OR5AS1Q8N127 324 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 HSD17B11Q8NBQ5 300 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 CCDC54Q8NEL0 328 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 OR14L1PQ8NHC6 308 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 ASB10Q8WXI3 467 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 GNPNAT1Q96EK6 184 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-208ENST00000506368 BMFQ96LC9 184 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 TM2D1Q9BX74 207 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 TGIF2Q9GZN2 237 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 SERGEFQ9UGK8 458 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 PADI1Q9ULC6 663 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 CLDN16Q9Y5I7 305 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 CCDC187A0A096LP49 1063 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 TNFRSF10CO14798 259 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 HCRTR2O43614 444 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 CRYABP02511 175 aaKnown RBP13.97□□□□□ -0.17
SCLT1-208ENST00000506368 OR5H8P0DN80 308 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 BCKDHBP21953 392 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 CCL1P22362 96 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 AKT2P31751 481 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 RND3P61587 244 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 HLA-DRB3P79483 266 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 SP5Q6BEB4 398 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-208ENST00000506368 PLXDC2Q6UX71 529 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 GRINAQ7Z429 371 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 SHISA5Q8N114 240 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 SSC4DQ8WTU2 575 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 OR1E3Q8WZA6 343 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 ABHD14BQ96IU4 210 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 HIST1H2BLQ99880 126 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 SYT3Q9BQG1 590 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 CTDSP1Q9GZU7 261 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 WSB1Q9Y6I7 421 aa13.97□□□□□ -0.17
SCLT1-208ENST00000506368 F5P12259 2224 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 TMEM131Q92545 1883 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 WDFY4Q6ZS81 3184 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 TMED7-TICAM2A0A0A6YYA0 188 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 CLDN34H7C241 214 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 SDCBPO00560 298 aaPredicted RBP13.96□□□□□ -0.17
SCLT1-208ENST00000506368 PITX3O75364 302 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 SCAF4O95104 1147 aaKnown RBP13.96□□□□□ -0.17
SCLT1-208ENST00000506368 GABRR1P24046 479 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 OTPQ5XKR4 325 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 LCN10Q6JVE6 187 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 SPSB3Q6PJ21 355 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 OR51T1Q8NGJ9 327 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 SHDQ96IW2 340 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 TGM7Q96PF1 710 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 KCNK17Q96T54 332 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 RARRES2Q99969 163 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 NAA60Q9H7X0 242 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 GPR84Q9NQS5 396 aa13.96□□□□□ -0.17
SCLT1-208ENST00000506368 ATXN7L1Q9ULK2 861 aaPredicted RBP13.96□□□□□ -0.17
SCLT1-208ENST00000506368 A0A087WZY1 265 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 TGIF2-C20orf24A0A0A6YYL0 155 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 ZNF727A8MUV8 499 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 ALG1L2C9J202 215 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 ZNF878C9JN71 531 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 NPIPA5E9PKD4 350 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms