RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ECDO95905 644 aaPredicted RBP13.89□□□□□ -0.19
SNCA-209ENST00000506244 TAS2R43P59537 309 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 IL24Q13007 206 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 CDK5R1Q15078 307 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 UBE2V2Q15819 145 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 ARMCX4Q5H9R4 360 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 ATPAF1Q5TC12 328 aaPredicted RBP13.89□□□□□ -0.19
SNCA-209ENST00000506244 IZUMO2Q6UXV1 221 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 ZNF841Q6ZN19 808 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 LHFPL2Q6ZUX7 228 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 AHSA2Q719I0 299 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 BPIFB6Q8NFQ5 453 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 NANPQ8TBE9 248 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 NPRL2Q8WTW4 380 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 FGGYQ96C11 551 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 ADAT3Q96EY9 351 aaPredicted RBP13.89□□□□□ -0.19
SNCA-209ENST00000506244 MMP26Q9NRE1 261 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 PSORS1C1Q9UIG5 152 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 DHDHQ9UQ10 334 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 AUP1Q9Y679 476 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 SVEP1Q4LDE5 3571 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 OR2AT4A6NND4 320 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 DVL1O14640 695 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 NDUFB3O43676 98 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 XPNPEP2O43895 674 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 NOS1APO75052 506 aaPredicted RBP13.88□□□□□ -0.19
SNCA-209ENST00000506244 ATP6V1G2O95670 118 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 CYB5AP00167 134 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 CD2P06729 351 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 PGA5P0DJD9 388 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 PPIAL4GP0DN37 164 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 RBP2P50120 134 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 ATP1B3P54709 279 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 IL13RA1P78552 427 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 LRRC10Q5BKY1 277 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 OR2G6Q5TZ20 316 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 PRIMA1Q86XR5 153 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 OR51A4Q8NGJ6 313 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 CPNE2Q96FN4 548 aaPredicted RBP13.88□□□□□ -0.19
SNCA-209ENST00000506244 MED30Q96HR3 178 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 CCL13Q99616 98 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 PDCD1LG2Q9BQ51 273 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 NUDT16L1Q9BRJ7 211 aaKnown RBP13.88□□□□□ -0.19
SNCA-209ENST00000506244 ANKRD60Q9BZ19 345 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 WDR13Q9H1Z4 485 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 BABAM2Q9NXR7 383 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 SCN3BQ9NY72 215 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 METRNQ9UJH8 293 aa13.88□□□□□ -0.19
SNCA-209ENST00000506244 E9PI62 339 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 SYNGR1O43759 233 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 NXPH2O95156 264 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 LIPFP07098 398 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 ACAA1P09110 424 aaPredicted RBP13.87□□□□□ -0.19
SNCA-209ENST00000506244 ATF1P18846 271 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 AZGP1P25311 298 aaKnown RBP13.87□□□□□ -0.19
SNCA-209ENST00000506244 PAX2Q02962 417 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 ACP7Q6ZNF0 438 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 SERPINA12Q8IW75 414 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 Q8IYB0 196 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 PNLDC1Q8NA58 520 aaKnown RBP13.87□□□□□ -0.19
SNCA-209ENST00000506244 OR5D14Q8NGL3 314 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 OR10AC1Q8NH08 325 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 ANGPTL6Q8NI99 470 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 RPS4Y2Q8TD47 263 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 GPR148Q8TDV2 347 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 ST8SIA4Q92187 359 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 SMIM19Q96E16 107 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 OPALINQ96PE5 141 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 NRIP2Q9BQI9 281 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 SMURF1Q9HCE7 757 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 SNTG1Q9NSN8 517 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 ERGIC3Q9Y282 383 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 DOCK11Q5JSL3 2073 aa13.87□□□□□ -0.19
SNCA-209ENST00000506244 KIR2DS1A0A191URI9 304 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 SLC1A7O00341 560 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 SIGLEC5O15389 551 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 MT-ND2P03891 347 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 MYF6P23409 242 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 GTF2A1P52655 376 aaPredicted RBP13.86□□□□□ -0.19
SNCA-209ENST00000506244 MTCP1P56278 107 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 PAX8Q06710 450 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 IKZF1Q13422 519 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 C6orf141Q5SZD1 244 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 LAIR2Q6ISS4 152 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 ZNF788Q6ZQV5 615 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 C1orf229Q6ZS94 237 aaPredicted RBP13.86□□□□□ -0.19
SNCA-209ENST00000506244 CALHM1Q8IU99 346 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 PARP16Q8N5Y8 322 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 FAM216BQ8N7L0 139 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 OR13C9Q8NGT0 318 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 MYDGFQ969H8 173 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 DACT3Q96B18 629 aaPredicted RBP13.86□□□□□ -0.19
SNCA-209ENST00000506244 SEH1LQ96EE3 360 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 CEP19Q96LK0 163 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 ZCCHC4Q9H5U6 513 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 FKBP14Q9NWM8 211 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 OPN4Q9UHM6 478 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 CLEC2DQ9UHP7 191 aa13.86□□□□□ -0.19
SNCA-209ENST00000506244 C22orf46C9J442 243 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 SULT1B1O43704 296 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms