RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ELL3Q9HB65 397 aaPredicted RBP10.39□□□□□ -0.75
UBE3D-206ENST00000505226 FGF21Q9NSA1 209 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 KPTNQ9Y664 436 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 POMT1Q9Y6A1 747 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 SPAG17Q6Q759 2223 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 LMO7DNF2Z398 122 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 TSPAN15O95858 294 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 MT-ND4LP03901 98 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 DBHP09172 617 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 OR8U8P0C7N1 319 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 DANCRP0C864 163 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 DMDP11532 3685 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 LTBRP36941 435 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 PRSS12P56730 875 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 GUK1Q16774 197 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 RNF212Q495C1 297 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 OR6X1Q8NH79 312 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 HPSE2Q8WWQ2 592 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 FAAP24Q9BTP7 215 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 NIT2Q9NQR4 276 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 DECR2Q9NUI1 292 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 EML6Q6ZMW3 1958 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 SERPINE3A8MV23 424 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 IGHV2-5P01817 119 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 SMIM6P0DI80 62 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 LMO1P25800 156 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 OPRM1P35372 400 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 ZNF41P51814 821 aaPredicted RBP10.39□□□□□ -0.75
UBE3D-206ENST00000505226 SUMO3P55854 103 aaPredicted RBP10.39□□□□□ -0.75
UBE3D-206ENST00000505226 ZNF616Q08AN1 781 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 BRICD5Q6PL45 260 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 LYZL2Q7Z4W2 148 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 SGPP2Q8IWX5 399 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 FAM24BQ8N5W8 94 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 EDARADDQ8WWZ3 215 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 DYRK2Q92630 601 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 MARS2Q96GW9 593 aaKnown RBP10.39□□□□□ -0.75
UBE3D-206ENST00000505226 PGAM5Q96HS1 289 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 MRGPRX4Q96LA9 322 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 PPP4R1LQ9P1A2 415 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 GHRLQ9UBU3 117 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 SHANK1Q9Y566 2161 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 TRAV20A0A0B4J274 112 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 TRBV11-1A0A0K0K1C0 115 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 A0A1B0GV50 99 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 TIAF1O95411 115 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 CTSDP07339 412 aaPredicted RBP10.38□□□□□ -0.75
UBE3D-206ENST00000505226 ASCL1P50553 236 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 NOVA1P51513 510 aaKnown RBP10.38□□□□□ -0.75
UBE3D-206ENST00000505226 PIGPP57054 158 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 KCNMB1Q16558 191 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 SLC25A53Q5H9E4 307 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 OPN5Q6U736 354 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 ZNF561Q8N587 486 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 WDR77Q9BQA1 342 aaPredicted RBP10.38□□□□□ -0.75
UBE3D-206ENST00000505226 ZMAT5Q9UDW3 170 aaKnown RBP10.38□□□□□ -0.75
UBE3D-206ENST00000505226 PADI1Q9ULC6 663 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 M0R036 132 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 ANGPTL7O43827 346 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 OR5AC1P0C628 307 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 OR2B8PP59922 312 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 POLR2GP62487 172 aaKnown RBP eCLIP10.38□□□□□ -0.75
UBE3D-206ENST00000505226 NHLH2Q02577 135 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 FAM209BQ5JX69 171 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 FAM69BQ5VUD6 431 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 C20orf196Q8IYI0 205 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 OR52M1Q8NGK5 317 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 TAAR9Q96RI9 348 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 PLEKHJ1Q9NW61 149 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 V9GYS6 101 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 A0A1W2PPE2 198 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 S100A6P06703 90 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 OR5H8P0DN80 308 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 TMEM225BP0DP42 221 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 NQO2P16083 231 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 RAB5AP20339 215 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 TOMM40LQ969M1 308 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 PIGQQ9BRB3 760 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 ZNF251Q9BRH9 671 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 EIF5A2Q9GZV4 153 aaKnown RBP10.38□□□□□ -0.75
UBE3D-206ENST00000505226 SDHAF3Q9NRP4 125 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 FAM212BQ9NTI7 297 aaPredicted RBP10.38□□□□□ -0.75
UBE3D-206ENST00000505226 ANXA10Q9UJ72 324 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 PIGLQ9Y2B2 252 aa10.38□□□□□ -0.75
UBE3D-206ENST00000505226 RRP8O43159 456 aaKnown RBP10.37□□□□□ -0.75
UBE3D-206ENST00000505226 EIF1BO60739 113 aaKnown RBP10.37□□□□□ -0.75
UBE3D-206ENST00000505226 EIF1P41567 113 aaKnown RBP10.37□□□□□ -0.75
UBE3D-206ENST00000505226 CSNK1EP49674 416 aaKnown RBP10.37□□□□□ -0.75
UBE3D-206ENST00000505226 TMEM187Q14656 261 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 TMEM176BQ3YBM2 270 aaPredicted RBP10.37□□□□□ -0.75
UBE3D-206ENST00000505226 LRRC18Q8N456 261 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 HAS2Q92819 552 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 Q96M66 194 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 RGCCQ9H4X1 137 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 ZNF160Q9HCG1 818 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 METTL1Q9UBP6 276 aaKnown RBP10.37□□□□□ -0.75
UBE3D-206ENST00000505226 CLN5O75503 358 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 DHRS3O75911 302 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 OR2J2O76002 312 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 CTSSP25774 331 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms