RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 NDUFS8O00217 210 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 GABRPO00591 440 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 CDIPTO14735 213 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 PIN1P1O15428 100 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 MAGEB3O15480 346 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 SC5DO75845 299 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 ALX3O95076 343 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 CYB5R3P00387 301 aaPredicted RBP8.44□□□□□ -1.06
NUP54-203ENST00000504173 JUNBP17275 347 aaPredicted RBP8.44□□□□□ -1.06
NUP54-203ENST00000504173 FSTP19883 344 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 TGFBR2P37173 567 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 RBMXP38159 391 aaKnown RBP8.44□□□□□ -1.06
NUP54-203ENST00000504173 PMELP40967 661 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 GPR6P46095 362 aaPredicted RBP8.44□□□□□ -1.06
NUP54-203ENST00000504173 HAAOP46952 286 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 RBP2P50120 134 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 ATP1B3P54709 279 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 TMEM33P57088 247 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 FABP5Q01469 135 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 ZNF181Q2M3W8 571 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 CHRFAM7AQ494W8 412 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 HSD17B12Q53GQ0 312 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 FAM76BQ5HYJ3 339 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 FAM27D1Q5T7N8 215 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 ASPHD2Q6ICH7 369 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 HAGHLQ6PII5 290 aaPredicted RBP8.44□□□□□ -1.06
NUP54-203ENST00000504173 UNQ9370/PRO34162Q6UXP9 181 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 TMEM91Q6ZNR0 172 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 PEG10Q86TG7 708 aaKnown RBP8.44□□□□□ -1.06
NUP54-203ENST00000504173 C11orf53Q8IXP5 236 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 C1orf87Q8N0U7 546 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 SCCPDHQ8NBX0 429 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 OR51A2Q8NGJ7 313 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 Q8TCH9 128 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 LRRC29Q8WV35 223 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 CPNE2Q96FN4 548 aaPredicted RBP8.44□□□□□ -1.06
NUP54-203ENST00000504173 SPACA5Q96QH8 159 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 TLNRD1Q9H1K6 362 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 TMEM138Q9NPI0 162 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 DCAF16Q9NXF7 216 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 RNF7Q9UBF6 113 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 FOXJ3Q9UPW0 622 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 IGKV1-27A0A075B6S5 117 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 TRAV8-7A0A075B6U6 113 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 TRDV1A0A1B0GX56 115 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 TMEM178BH3BS89 294 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 GPX5O75715 221 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 ARL6IP5O75915 188 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 PLATP00750 562 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 UCHL1P09936 223 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 SLC25A16P16260 332 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 CD36P16671 472 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 IGFBP3P17936 291 aaPredicted RBP8.43□□□□□ -1.06
NUP54-203ENST00000504173 GIFP27352 417 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 BDKRB2P30411 391 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 POU3F4P49335 361 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 MTCP1P56278 107 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 RIN1Q13671 783 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 AVPI1Q5T686 147 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 DDI2Q5TDH0 399 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 ZNF529Q6P280 563 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 WDR82Q6UXN9 313 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 DNM1P46Q6ZS02 220 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 SATL1Q86VE3 508 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 ANGPTL5Q86XS5 388 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 BOLLQ8N9W6 283 aaKnown RBP8.43□□□□□ -1.06
NUP54-203ENST00000504173 OR10Z1Q8NGY1 313 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 ZNF671Q8TAW3 534 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 PHYHIPQ92561 330 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 RAB1CQ92928 201 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 RFT1Q96AA3 541 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 PKIBQ9C010 78 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 BPESC1Q9GZL8 116 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 SLITRK2Q9H156 845 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 TCF7L1Q9HCS4 588 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 EXOSC4Q9NPD3 245 aaKnown RBP8.43□□□□□ -1.06
NUP54-203ENST00000504173 STUB1Q9UNE7 303 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 POLDIP2Q9Y2S7 368 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 NPTNQ9Y639 398 aa8.43□□□□□ -1.06
NUP54-203ENST00000504173 ABCA1O95477 2261 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 PPIAL4EA0A075B759 164 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 ISPDA4D126 451 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 PPIAL4DF5H284 164 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 SYNGR1O43759 233 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 RHBDL1O75783 438 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 ZNF205O95201 554 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 CYB5AP00167 134 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 MAS1P04201 325 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 ALDOBP05062 364 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 PPIAL4FP0DN26 164 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 GALP22466 123 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 CALRP27797 417 aaKnown RBP8.42□□□□□ -1.06
NUP54-203ENST00000504173 CD80P33681 288 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 NR4A2P43354 598 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 GMFBP60983 142 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 BTG1P62324 171 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 KISS1Q15726 138 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 FAM201AQ5SY85 155 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 LCE2DQ5TA82 110 aaPredicted RBP8.42□□□□□ -1.06
NUP54-203ENST00000504173 CD200R1LQ6Q8B3 271 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms