RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 STEAP3Q658P3 488 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 ELP2Q6IA86 826 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 MZT2BQ6NZ67 158 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 CRIP3Q6Q6R5 217 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 SLC22A25Q6T423 547 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 DNM1P46Q6ZS02 220 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 LINC00596Q86U02 117 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 SNX29P2Q8IUI4 249 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM89BQ8N5H3 189 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 CELF2-AS1Q8N7Q2 184 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 ZNF611Q8N823 705 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 POC5Q8NA72 575 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 Q8NFD4 153 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 OR51T1Q8NGJ9 327 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 OR5D18Q8NGL1 313 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 OR10R2Q8NGX6 335 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 OR51F2Q8NH61 342 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 TMEM171Q8WVE6 324 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 MRPL24Q96A35 216 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 ZC3HAV1LQ96H79 300 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 C1orf147Q96MC9 270 aaPredicted RBP6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 ABHD1Q96SE0 405 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 DIRC2Q96SL1 478 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 OR51I2Q9H344 312 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 CA10Q9NS85 328 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 ZNF107Q9UII5 783 aaPredicted RBP6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 FBXO9Q9UK97 447 aaPredicted RBP6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 POU2F3Q9UKI9 436 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 BSNQ9UPA5 3926 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 TRAV18A0A075B6X5 111 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 A0A1W2PQ09 198 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 NKX2-6A6NCS4 301 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 DPRXA6NFQ7 191 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 RAB27BO00194 218 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 CA11O75493 328 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 RBBP9O75884 186 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 GOSR1O95249 250 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 HTR3BO95264 441 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 LPLP06858 475 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 MELTFP08582 738 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 TNFSF4P23510 183 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 FAUP35544 74 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 CBX5P45973 191 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 FGF12P61328 243 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 BSPH1Q075Z2 132 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 DYRK1AQ13627 763 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 BAK1Q16611 211 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 TRIM16LQ309B1 348 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 NHLRC3Q5JS37 347 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 FIP1L1Q6UN15 594 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 SLC25A26Q70HW3 274 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 OSR2Q8N2R0 312 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 TOMM5Q8N4H5 51 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 CHPT1Q8WUD6 406 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 ERGIC1Q969X5 290 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 RAB3CQ96E17 227 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 COX4I2Q96KJ9 171 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 Q96M66 194 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 NEDD4LQ96PU5 975 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 GAL3ST1Q99999 423 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 SELENOIQ9C0D9 397 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 LPAR5Q9H1C0 372 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 AUNIPQ9H7T9 357 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 SPACA1Q9HBV2 294 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 DUSP13Q9UII6 198 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 ZDHHC8Q9ULC8 765 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 HSF4Q9ULV5 492 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 ATP23Q9Y6H3 246 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 ATRXP46100 2492 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 PCNX1Q96RV3 2341 aa6.94□□□□□ -1.3
TOPBP1-202ENST00000503338 NAP1L6A6NFF2 107 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 H7C417 338 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 SPRY1O43609 319 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 NOS1APO75052 506 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 PTBP3O95758 552 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 GLAP06280 429 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 CSF1P09603 554 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 HIST1H1DP16402 221 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 PMELP40967 661 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 CD200P41217 278 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 SRP9P49458 86 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 VEGFCP49767 419 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 IFITM3Q01628 133 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 TFF3Q07654 80 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 IL13RA2Q14627 380 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 OXA1LQ15070 435 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 NKPD1Q17RQ9 610 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 MPV17LQ2QL34 196 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 ZNF260Q3ZCT1 412 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 CDNFQ49AH0 187 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM209AQ5JX71 171 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 ZNF57Q68EA5 555 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 OR10K2Q6IF99 312 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 HAGHLQ6PII5 290 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 VHLLQ6RSH7 139 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 Q6ZTK2 550 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 C22orf34Q6ZV56 151 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 C1QL2Q7Z5L3 287 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 CALHM1Q8IU99 346 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms