RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 RPL26P61254 145 aaKnown RBP3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 ARF6P62330 175 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 GNGT1P63211 74 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 AESQ08117 197 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 KIR2DS1Q14954 304 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 ACSM3Q53FZ2 586 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 PDZD11Q5EBL8 140 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 FAM78AQ5JUQ0 283 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 MEDAGQ5VYS4 303 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 MED27Q6P2C8 311 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 WDR82Q6UXN9 313 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 TFAP2EQ6VUC0 442 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 RBMS3Q6XE24 437 aaKnown RBP3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 TIFABQ6ZNK6 161 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 CCDC121Q6ZUS5 278 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 ACOT7LQ6ZUV0 252 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 HORMAD1Q86X24 394 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 FTMTQ8N4E7 242 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 TMEM105Q8N8V8 129 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 FAM222BQ8WU58 562 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 RNF138Q8WVD3 245 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 C22orf15Q8WYQ4 148 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 NABP1Q96AH0 204 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 CLDN23Q96B33 292 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 S100PBPQ96BU1 408 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 ZBTB9Q96C00 473 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 FBXO17Q96EF6 278 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 PRAC1Q96KF2 57 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 MAGEB18Q96M61 343 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 QKIQ96PU8 341 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 NMUR2Q9GZQ4 415 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 CDC42EP4Q9H3Q1 356 aaKnown RBP3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 DSN1Q9H410 356 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 TRABDQ9H4I3 376 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 CLMPQ9H6B4 373 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 ACOT13Q9NPJ3 140 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 PRODH2Q9UF12 536 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 RPL26L1Q9UNX3 145 aaKnown RBP3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 ACOT9Q9Y305 439 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 FRYQ5TBA9 3013 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 SPTBN2O15020 2390 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 FER1L5A0AVI2 2057 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 GREB1Q4ZG55 1949 aa3.46□□□□□ -1.85
HMGB1P21-201ENST00000502313 ACACBO00763 2458 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 IGLV3-10A0A075B6K4 115 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 TEX48A0A1B0GUV7 120 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 IQCMA0A1B0GVH7 501 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 A0A1W2PS18 150 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 C10orf142B7Z368 130 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 C21orf140B9A014 251 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 C16orf97H3BN30 126 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 H3BQF6 201 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 M0R036 132 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 GABRPO00591 440 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 PHF1O43189 567 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 PI15O43692 258 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 CCDC22O60826 627 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 EIF3GO75821 320 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 DCTN3O75935 186 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 IGLV3-25P01717 112 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 CD74P04233 296 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 ARG1P05089 322 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 KLK3P07288 261 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 CD48P09326 243 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 OR8U9P0C7N5 309 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 ZSCAN5DPP0CG00 497 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 RAB4AP20338 218 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 PVALBP20472 110 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 ATP6V1B2P21281 511 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 GRPRP30550 384 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 SERPINB5P36952 375 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 GALR1P47211 349 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 RORCP51449 518 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 UBE2E1P51965 193 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 SNRPD1P62314 119 aaKnown RBP3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 SLC7A9P82251 487 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 SEMG2Q02383 582 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 GNA12Q03113 381 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 ST3GAL4Q11206 333 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 TWF1Q12792 350 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 ILF3Q12906 894 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 EIF4EBP2Q13542 120 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 ZNF235Q14590 738 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 TMED2Q15363 201 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 TRAM1Q15629 374 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 ZNF726P1Q15940 193 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 CCNJQ5T5M9 372 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 TPTE2P1Q5T6R2 138 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 FAM27D1Q5T7N8 215 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 NCBP2-AS2Q69YL0 99 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 FBXL22Q6P050 247 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 C9orf47Q6ZRZ4 202 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 Q6ZVH6 145 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 MRPL52Q86TS9 123 aaKnown RBP3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 TMEM135Q86UB9 458 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 TRAPPC5Q8IUR0 188 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 NAXDQ8IW45 347 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 ZNF567Q8N184 647 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 CA13Q8N1Q1 262 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms