RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 ST20Q9HBF5 79 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 MANBALQ9NQG1 85 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 ANKRD34CP0C6C1 535 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 OR52M1Q8NGK5 317 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 OR10X1Q8NGY0 326 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 PRDM15P57071 1507 aaPredicted RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 KLF4O43474 513 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 PLA2G12AQ9BZM1 189 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 MED20Q9H944 212 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 ZAR1LA6NP61 321 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 SEC11BP0C7V7 166 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 RHOQP17081 205 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 CD22P20273 847 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 CLDN18P56856 261 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TGIF1Q15583 401 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 OR4A16Q8NH70 328 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 FUBP1Q96AE4 644 aaKnown RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TMEM45BQ96B21 275 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 CES1P1Q9UKY3 287 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 HMGXB3Q12766 1538 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 B3GALT2O43825 422 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 MEOX1P50221 254 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 CLRN1P58418 232 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 GNG5P63218 68 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 DMRTC2Q8IXT2 367 aaPredicted RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 OR4D5Q8NGN0 318 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 NEIL2Q969S2 332 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 A0A087WWC5 75 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TRAV8-4A0A0B4J246 113 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 FAHD1Q6P587 224 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 A0A0G2JLM5 398 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 RAB38P57729 211 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 MRPL30Q8TCC3 161 aaKnown RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 C19orf53Q9UNZ5 99 aaPredicted RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TRAV26-1A0A087WT03 109 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 S1PR2O95136 353 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 HSPB1P04792 205 aaKnown RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 IDSP22304 550 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TIA1P31483 386 aaKnown RBP eCLIP4.29□□□□□ -1.723e-25■■■■■ 31.6
NEAT1-202ENST00000501122 SLC35B1P78383 322 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 DUX4L9Q6RFH8 374 aaPredicted RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TTC9BQ8N6N2 239 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 MAGEH1Q9H213 219 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TBC1D3EA0A087X179 549 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 PMELP40967 661 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 PCBP3P57721 371 aaKnown RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 SYPL1Q16563 259 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 SIRT6Q8N6T7 355 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TMEM204Q9BSN7 226 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 ROBO3Q96MS0 1386 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 PLXNB1O43157 2135 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 KLRC4-KLRK1H3BQV0 150 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 SNU13P55769 128 aaKnown RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 MEIG1Q5JSS6 88 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 DLEU7Q6UYE1 221 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TMEM116Q8NCL8 245 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 PTRH2Q9Y3E5 179 aaKnown RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TRAV8-1A0A0A6YYK1 113 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 PPIAL4DF5H284 164 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 AMBPP02760 352 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 PMP22Q01453 160 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 DUSP2Q05923 314 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 RNPS1Q15287 305 aaKnown RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 CLECL1Q8IZS7 167 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 PGLYRP3Q96LB9 341 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 PSENENQ9NZ42 101 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 EREGO14944 169 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 GDF9O60383 454 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 CXCL14O95715 111 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 SELEP16581 610 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 MS4A5Q9H3V2 200 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TMEM106BQ9NUM4 274 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 CACNA1HO95180 2353 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 FURINP09958 794 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 SSBP2P81877 361 aaPredicted RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 LAIR1Q6GTX8 287 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 WFDC8Q8IUA0 241 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 OR10G3Q8NGC4 313 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 RTP4Q96DX8 246 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 FUBP3Q96I24 572 aaKnown RBP eCLIP4.29□□□□□ -1.722e-20■■■□□ 15.9
NEAT1-202ENST00000501122 NXT1Q9UKK6 140 aaKnown RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TMEM88BA6NKF7 163 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 FOXK1P85037 733 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TMEM179BQ7Z7N9 219 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 WDTC1Q8N5D0 677 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 CADM4Q8NFZ8 388 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TCRBV5S2A0A599 114 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 MPLP40238 635 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TMEM86AQ8N2M4 240 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TMEM59Q9BXS4 323 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 HAPLN2Q9GZV7 340 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 MAGT1Q9H0U3 335 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 OR10A2Q9H208 303 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 FAM124BQ9H5Z6 455 aaPredicted RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 TMEM38AQ9H6F2 299 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 SEBOXQ9HB31 216 aaPredicted RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 ADRA2AP08913 450 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 P2RY1P47900 373 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 CCR5P51681 352 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 OR8A1Q8NGG7 326 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms